Eutrema salsugineum (saltwater cress): EUTSA_v10027582mg
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Entry
EUTSA_v10027582mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K16189
phytochrome-interacting factor
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
EUTSA_v10027582mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eus03000
]
EUTSA_v10027582mg
Transcription factors [BR:
eus03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
EUTSA_v10027582mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
CCDC71L
Motif
Other DBs
NCBI-GeneID:
18028690
NCBI-ProteinID:
XP_006412909
UniProt:
V4MGE5
LinkDB
All DBs
Position
Unknown
AA seq
469 aa
AA seq
DB search
VCACFCMEIRGEDDIVELLWKSGQVVQSSQSQRPISVPPPILRGSGSGGGGGVEGNAPLP
LPPPPHTPLLDQPEPSHHQSLLIQEDEMVSWLYHTHREDGFYSDLIYPGVASIPATQPLS
SASFAPPPPVDLPSSQILDTRRVANFTNLSRFRGNIFSGGRVEAAGPLVPLPVVSLSTQV
GSSLTPSSSATESCLTPATQGSENRSTAIIGGVSRTFVVPGLEKVVATEIAGTSSSGVSK
VEAEPIQVQPATETRTADDRKGKERQETADDIEDTKEAPGSTSRKRSRAAEMHNLSERKR
RGRINERMKALQELVPRSNKSDKASMLEDAIEYVKSLQMQLHMMSQNMQQFMPHMAMGMM
GMNRPPFIHFPGIASHMAGPGPSYPAPPYPFPNNPAFDPSRLHLPSQQPDPAPNQPRLPG
YLNPYSQFVGLPQMQQPPPPLQNQTTSQLSFSLPSSVKEPEDQENQPTG
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
gtctgtgcatgtttttgtatggaaattaggggtgaagatgatatcgtggagctcttatgg
aagagtggccaagtcgttcaaagcagccagtcacagagacccatctccgttcctcctccc
attctccgcggcagcggaagcggtggcggtggcggtgtagaaggaaatgctccccttccg
cttccgcctccgcctcacactcccctgcttgaccaaccggaaccgtctcatcatcagagt
ctattaatccaagaagacgaaatggtttcttggctttaccatactcaccgcgaggatggt
ttctactccgatctaatctatcccggcgtcgcctccattccggctactcagccgctaagt
tccgcctcttttgcaccaccaccaccagtcgatctgcctagcagtcagattcttgacacg
agaagagtggccaactttaccaacttgtcgaggtttagagggaacatattttccggcggt
agagttgaagcagctggaccgttggttcctcttccggtggtgagcctgtcgacgcaggtg
ggatcgagcttgactccgtcgtcttcggcgactgaatcctgtctaacaccagcgacgcaa
ggcagcgagaatcgatcgacggccatcattggcggagtctcgcgcacttttgtagttccc
ggtcttgaaaaggtggttgcgactgagatcgctggaacatcatcttccggggtctccaag
gtcgaagcagagccgattcaggtacagccagcgacggagacgagaactgccgatgacagg
aagggaaaggagagacaagaaaccgctgacgatatcgaggatactaaagaagctcctggt
tcaacgtctaggaagaggtcacgagctgcagaaatgcataatctctccgaaaggaaacgg
agagggaggatcaacgagaggatgaaggctctgcaagaactcgttcctcgcagcaacaag
tctgataaagcttccatgctggaagatgctatcgagtacgtgaaatcgctacagatgcaa
ctacatatgatgtcacaaaatatgcaacaattcatgccccacatggccatggggatgatg
ggtatgaaccggcctccgttcatacatttccctggcatagcttctcatatggctggtccg
ggtccatcatatccagcaccgccctatccttttccaaacaatccagcctttgacccatct
agactccatttaccaagtcagcagcctgacccagcgccgaaccagcctcggcttccaggt
tacttgaatccttatagccagtttgttggtctccctcagatgcaacaacctcctcctccg
ttgcagaatcaaacaacatcacagctgagttttagcctcccgagcagtgtcaaggaacct
gaggatcaggagaaccaaccgacaggttag
DBGET
integrated database retrieval system