Eubacterium sulci: ADJ67_01485
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Entry
ADJ67_01485 CDS
T04038
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
euu
Eubacterium sulci
Pathway
euu03030
DNA replication
euu03410
Base excision repair
euu03420
Nucleotide excision repair
euu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
euu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ADJ67_01485
03410 Base excision repair
ADJ67_01485
03420 Nucleotide excision repair
ADJ67_01485
03430 Mismatch repair
ADJ67_01485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
euu03032
]
ADJ67_01485
03400 DNA repair and recombination proteins [BR:
euu03400
]
ADJ67_01485
Enzymes [BR:
euu01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
ADJ67_01485
DNA replication proteins [BR:
euu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ADJ67_01485
DNA repair and recombination proteins [BR:
euu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
ADJ67_01485
NER (nucleotide excision repair)
GGR (global genome repair) factors
ADJ67_01485
MMR (mismatch excision repair)
DNA ligase
ADJ67_01485
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ADJ67_01485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
BRCT
HHH_2
BRCT_2
HHH_5
PTCB-BRCT
Nlig-Ia
Motif
Other DBs
NCBI-ProteinID:
AKT46505
LinkDB
All DBs
Position
307148..309124
Genome browser
AA seq
658 aa
AA seq
DB search
MADVKALMQEKIKVLDEASKAYYARGEEIMSNFEYDKIYDELVELEKQSGIILAGSPTQK
VGYEILSELPKEVHPSRMLSLDKTKSREELKDWLGDHQGILSWKLDGLTIVLTYEDGKLL
KAVTRGNGDVGEVITANAKTFVNLPHQIAYKGALVLRGEAVISYADFDKINSEIEDGAGK
YKNPRNLCAGSVRQLNSEITASRRVRFFAFTLVSAEDINFKKRSEQINWLKDQGFDTVKE
RLVNADNIIETVDLFESEVHENPIPSDGLVLAFDDLEYSASLGTTAKFPRDSIAFKWQDQ
TEKTTLREIEWNASRTGLINPIAVFDPVELEGTTVSRASVHNLSIVEELALGIGDTIEVY
KANMIIPQISANLTRSGNLELPKTCQACDTPVIIKNEQGVKTINCPNPKCPAKRIKSLTL
FVSRDAMNIDGLSEATIEKFADAGYLKELADFYHLENHKDEIVKTEGFGEKSFNNMQKAI
DASRKVKPEKLLYALGIPGIGVANAKLISKACKAEWDKIESISKSELLEIDGIGDVMAAA
YVSFFDDEENKAKLARLKAELDIDESFEETGALLKGLTFVITGSLNHYANRDELKALIES
LGGKVSGSVSAKTSYLINNDTASTSGKNKKAKELGIAVIDEEKIKNCIESEDLSLLMD
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgtaaaggctttgatgcaggaaaagataaaggtgctcgatgaggcttcgaag
gcatattatgcgcgtggagaggaaatcatgagcaattttgagtacgacaaaatctatgac
gagcttgtcgagctcgaaaagcaaagtggaataatccttgcgggaagtccaactcagaag
gtgggttatgaaattctttcggagcttcctaaggaggttcatccttcgaggatgctttcg
ctagataagactaagagcagggaagaactcaaggactggcttggagatcatcaaggaatt
ctatcttggaagctagatggtctaaccatagttttgacatatgaggacggaaagctgctt
aaggctgttactcgtggaaatggcgatgtaggcgaggtaatcactgcgaatgcgaagacc
tttgtgaaccttccacatcaaattgcatataagggagctcttgtgctaagaggtgaggca
gttatttcctatgccgactttgataagatcaatagcgaaattgaggatggcgctggcaag
tacaagaaccctagaaatctttgcgctggctcagtaagacagttaaatagtgaaattact
gcatcgcgcagggttagattctttgcatttacgcttgtgagtgctgaggatattaacttc
aagaagagaagtgagcagattaattggctaaaagatcagggctttgatactgttaaagaa
agacttgtaaacgctgataacataattgaaactgttgatttatttgagtccgaggttcac
gaaaacccaattccatcagatggactcgttttggcctttgatgaccttgagtatagtgca
agccttggaacgacggcaaagttccctagggactcaattgcatttaagtggcaggaccag
actgagaagactactttgagggagattgagtggaacgcctcaagaacaggccttataaat
ccgattgctgtctttgaccctgttgaactagagggtacgacggtttcgcgtgcatcagtt
cacaatttaagcatagttgaggagcttgctcttggaattggagatacgatagaggtatac
aaggcaaacatgattatccctcagatttcagcaaatctaacgcgaagtggaaatctagaa
ttacctaagacctgccaagcatgcgacactccagtgataatcaaaaacgagcagggagta
aagacgataaattgtccaaaccctaagtgcccagcaaagcgaatcaagagtctaacgctt
ttcgtttctcgcgatgcaatgaatattgacggattatctgaagcaactattgagaagttt
gcagatgctggatacctaaaggagctagcagatttctaccacctagagaatcataaggat
gagattgttaagactgagggctttggagagaaatcctttaataatatgcaaaaggcaatt
gatgcttcgagaaaggttaagcctgaaaaacttctttatgcgcttggaatcccagggatt
ggcgttgccaatgcaaagcttatatcaaaggcatgcaaggccgagtgggacaagattgaa
tcgatatcaaagtccgagctgcttgagatagatggaatcggtgatgttatggcagcggct
tatgtctccttctttgatgacgaagagaacaaggctaagcttgcccgccttaaggcagag
cttgatatagatgagagctttgaagagactggcgctttgctcaaaggcctaacatttgta
attactggttcgctcaaccactatgcgaatagagatgagcttaaggctttgatagagtca
cttggcggtaaggtttcgggctcggtaagtgcaaagacttcatatttaatcaataacgat
actgcatcgacttcaggaaagaacaagaaggcgaaagagcttggcatcgcagtcatagat
gaagagaaaataaagaattgtatagaaagtgaagatttatctttgctaatggactag
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