Euzebya pacifica: DVS28_b0379 Help Entry DVS28_b0379       CDS       T05999                                  Name (GenBank) DNA ligase   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism euz  Euzebya pacifica Pathway euz03030   DNA replication euz03410   Base excision repair euz03420   Nucleotide excision repair euz03430   Mismatch repair Brite KEGG Orthology (KO) [BR:euz00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     DVS28_b0379    03410 Base excision repair     DVS28_b0379    03420 Nucleotide excision repair     DVS28_b0379    03430 Mismatch repair     DVS28_b0379  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:euz03032]     DVS28_b0379    03400 DNA repair and recombination proteins [BR:euz03400]     DVS28_b0379 Enzymes [BR:euz01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      DVS28_b0379 DNA replication proteins [BR:euz03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      DVS28_b0379 DNA repair and recombination proteins [BR:euz03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      DVS28_b0379    NER (nucleotide excision repair)     GGR (global genome repair) factors      DVS28_b0379    MMR (mismatch excision repair)     DNA ligase      DVS28_b0379   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       DVS28_b0379 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden OB_DNA_ligase BRCT HHH_2 HHH_5 PTCB-BRCT BRCT_2 DNA_ligase_ZBD Motif Other DBs NCBI-ProteinID:  AXV10149 UniProt:  A0A346Y6Q2 LinkDB All DBs Position pEDY32-46I:334253..336301 Genome browser AA seq 682 aa AA seqDB search MTATTAVPSPTEIVTDRAAFDIASAVALDAADAYYGGNVSPLDDAAYDATVEAIAKAVQT NGWPAPPGLLDEVAAGTNAGDIVHPRRMLSLAKATTAEEIDKWWDRHRPTEGVIVTPKMD GSSARARFVPVGDGTARLDAVVSRGNGEAGEAYANHDEITNLPQTVPMPPGITGPFDIVG EVYMDAAAFDAANDARRTKGKAPFVNPRNCIAGMLRRDKSEAEHDYDGRLTFAAYDYYGE TPGDDDGDSYHDRLTTLATMGVPTVATVTDGPVLANDPTDAMALIDRIGGLRDTLDFEID GAVCRVRSNDDATRIGDRSDGKVPNYAVAFKYPAQARRTTIMDISYDGIGRTGLITPVAR VAPVEVSGVTVSNVTLHNVNEAVRLGVAIGCEVEIARMGDVIPKVVSVLPHDLPPWQAPT ACPNCGSDDIDKSELRWRCTNPDCSTLAALTYAVSRDALDADGVSGKVIEALMAAGKVSD LADLYRLTAADVAGLDGWGTTSGEQIVAAIDATRNRPLNRFLTALGVRMTGRTMCRRIAN HYGTLDALLDVITNGSPADLTVVDGVGDTKAQHIFDGFRSRLDLIADLRSLGVEPTGATV QASADDPIVGKTIVVSGAVPGMSRTEVKEMIESRGGKASSSVSKNTSLVVVEHGSTSSKA KKAADLGIPTMDPADFAAILST NT seq 2049 nt NT seq  +upstreamnt  +downstreamnt ttgaccgccaccaccgcagtcccctcccccaccgagatcgtcacggaccgggcggcgttc gacatcgcctccgccgtcgccctggacgccgccgacgcctactacggcggcaacgtctcc cccctggacgacgccgcctacgacgccaccgtggaagccatcgccaaggccgtacagacc aacggctggcccgcgcctccgggcctgctcgacgaggtcgctgccggcaccaacgccggc gacatcgtccacccccgccgcatgctgtcgctggccaaggccaccaccgcagaggagatc gacaagtggtgggaccgccaccgccccaccgagggcgtcatcgtcaccccaaagatggac gggtccagcgctcgagccaggttcgtgccggtcggcgacggcaccgcccgactggacgcg gtcgtgtcgcgtggcaacggcgaggcaggcgaggcctacgccaaccacgacgagatcacc aacctcccccagaccgttcccatgccccccggcatcaccggccccttcgacatcgtcggc gaggtctacatggacgccgccgccttcgacgccgccaacgacgctcgccgcaccaagggc aaggccccgttcgtcaacccgcgcaactgcatcgccgggatgctgcgccgcgacaagtcc gaggccgagcacgactacgacggacgcctcaccttcgccgcctacgactactacggcgag actcccggcgacgatgacggcgactcctaccacgaccgtctcaccaccctcgccaccatg ggcgtcccgaccgtcgccacggtcaccgacggcccggtgctggccaacgaccccaccgac gccatggccctgatcgaccggatcggcggcctgcgcgacaccctcgacttcgagatcgac ggcgccgtctgccgggtccgcagcaacgacgacgccacccggatcggcgaccggtccgac ggcaaggtccccaactacgccgtggcgttcaagtacccggcgcaggcccgccgcaccacg atcatggacatctcctacgacggcatcggcaggaccggcctgatcacccccgtcgcccgc gtcgcccccgtcgaggtgtccggtgtgaccgtgtccaacgtcaccctgcacaacgtcaac gaggcagtccgtctcggggtcgcgatcggctgcgaggtcgagatcgcccgcatgggcgac gtcatccccaaggtcgtgtcggtcctcccccacgacctgccgccctggcaggcccccacc gcctgccccaactgcgggtccgacgacatcgacaagtccgagctgcggtggcgctgcacc aaccccgactgctccacccttgccgcgctgacctacgccgtctcccgcgacgccctcgac gccgacggggtgtcgggcaaggtcatcgaagcgctgatggccgccgggaaggtgtccgac ctcgccgacctgtaccggctcaccgccgctgacgtcgccggactcgacggctgggggacc acctcgggcgagcagatagtcgccgccatcgacgcgacccggaaccggccgctgaaccgc ttcctcaccgccctcggcgtccgcatgacgggccgcaccatgtgccgccggatcgccaac cactacgggacgctggacgccctgctggacgtcatcaccaacgggtcgcccgccgacctg accgtcgtcgacggcgtcggcgacaccaaggcccagcacatcttcgacgggttccgcagc cgtctggacctcatcgccgacctccgctccctcggcgtcgaaccgaccggcgcgaccgtc caggcgtccgccgatgaccccatcgtcggcaagaccatcgtggtctccggggcggtcccc ggtatgtcgcgaaccgaggtcaaggagatgatcgagtcacggggcggcaaggcctcctca tcggtgtcgaagaacacctcgctggtggtcgtggagcacggcagcaccagcagcaaggcc aagaaggccgctgacctgggcatccccaccatggacccggccgacttcgccgcgatcctc tccacctaa

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