Eggerthella sp. YY7918: EGYY_21750
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Entry
EGYY_21750 CDS
T01566
Name
(GenBank) hypothetical protein
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
eyy
Eggerthella sp. YY7918
Pathway
eyy03030
DNA replication
eyy03410
Base excision repair
eyy03420
Nucleotide excision repair
eyy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
eyy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EGYY_21750
03410 Base excision repair
EGYY_21750
03420 Nucleotide excision repair
EGYY_21750
03430 Mismatch repair
EGYY_21750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eyy03032
]
EGYY_21750
03400 DNA repair and recombination proteins [BR:
eyy03400
]
EGYY_21750
Enzymes [BR:
eyy01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
EGYY_21750
DNA replication proteins [BR:
eyy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
EGYY_21750
DNA repair and recombination proteins [BR:
eyy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
EGYY_21750
NER (nucleotide excision repair)
GGR (global genome repair) factors
EGYY_21750
MMR (mismatch excision repair)
DNA ligase
EGYY_21750
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
EGYY_21750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
Nlig-Ia
PTCB-BRCT
HHH
RNA_ligase
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
BAK45264
LinkDB
All DBs
Position
complement(2337545..2339683)
Genome browser
AA seq
712 aa
AA seq
DB search
MTDEQQSLLNEHALAEATSDPAARVDALRREIEHHSYLYYAQDAPEISDGAFDSLMRELR
ELEAAHPELVDPASPTQRVGGYVGEQFAPVRHERRMYSLDNAMDLGELDAWIERVEEAFG
RMVPVVCELKIDGSSIALTYEDGRLVRAATRGDGTTGEDVTANMRTVKDVPLRLRVEALA
ALSNAAAPVELRGEVYMPKSSFEALNVAAEANGKQAFANPRNAAAGSLRQKDPSVTSHRD
LSTFLYAVADERALAVEGQWELLQWLREAGFHVNPDVELCETREAVHAFCARAVERRDSL
PYEIDGVVVKVNAFAQQAAMGYTARAPRWAIAFKFPPEEKTTLLRDITVQVGRTGKLTPV
AEMDPVSVAGSTVARATLHNEDEVQRKDVRVGDTVIVRKAGDVIPEVLGPVLSLRPADAV
QWQMPRTCPSCGSPVIREEGEVDFRCISIDCPAQALERLLHWASRGAMDIDGMGEEIVTR
LVESGRLSDVADYYTLDEVELSLLDMGRVNKDGEPIRLGQTMAKKLVAAIDASRGRAFAR
ALFGLGMRHVGKTIAELLAGAYPSIDALMAASEEDLAAIDGVGPKIAHSVYLFLRTPDNV
AVIERLRKRGVALADEAVEEGEQLPQTLEGLTFVLTGSLVESGMTRDEASAALKARGAKV
SGSVSKKTNYVVAGEAAGSKYDKAIALGVPVLDEAALLRILETGEVPEAPAE
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgacagacgaacaacaatccctgctcaatgagcatgcgctggctgaagcgacgagcgat
ccggcggcgcgcgtcgatgcgctccggcgcgaaatcgaacaccatagctatctgtactat
gcgcaggacgcgccggagatttccgacggagcgttcgactcgcttatgcgcgagctgcgc
gaactggaagcggcgcaccctgaactggtggatccggcaagtcccacgcagcgtgtgggt
gggtatgtgggcgagcagttcgcgcctgtgcgtcatgaacggcgcatgtattcgctcgac
aacgccatggacttaggcgagctcgacgcgtggattgagcgggtggaagaagcgtttggc
cgcatggtgcccgtggtgtgcgagctcaagattgacgggtcgtccatcgctttgacctat
gaggatggtcgtctggtgcgcgccgccacgcgcggcgacggtacgaccggtgaagatgtg
acggccaacatgcgcacggtgaaagacgtgccgctacgcctgcgggtcgaggcgctcgcg
gcgctctcgaacgctgccgcgcccgtggagttgcgcggcgaggtgtatatgcccaagagc
agcttcgaggcgctcaacgtcgccgccgaggccaacggcaagcaggcgtttgccaacccg
cgtaacgctgctgcgggaagcttgcggcagaaggatccgtccgttacttcgcatcgcgac
ctttcgacgtttctgtacgccgtggccgacgagcgtgcgcttgcggtggagggtcaatgg
gagcttttgcagtggttgcgcgaagcgggctttcatgtgaatccggacgtggagctctgc
gaaacgcgcgaagccgtgcacgcgttctgcgcacgtgcggttgagcgtcgcgacagcctg
ccgtatgaaattgatggcgtggtggtgaaggtgaacgcctttgcgcagcaggctgctatg
ggctatacggcgcgagcgccgcgctgggctatcgcattcaagtttccgcccgaggagaag
acgacgcttctgcgcgacattaccgtgcaggtgggacgcaccggaaagctcacgccggtg
gcggagatggatccggtgtcggttgccggttccacggtggcgcgtgcgacgctgcataac
gaggacgaagtacagcgcaaggatgtgcgcgtgggcgataccgttatcgtgcgcaaggcg
ggtgacgtgatccccgaggttttgggcccggtgctctcgcttcgcccggccgacgcggtg
cagtggcagatgccgcgcacgtgtccgtcgtgcggttcgcccgtcatccgcgaagaaggt
gaggtggacttccgctgcatttccatcgactgcccggcgcaggcgttggagcggctgctg
cactgggcgagccgtggtgccatggacatcgacggcatgggcgaggaaattgttacgcgt
ctcgtggagagcggtcgtttgtccgacgtggccgattactacacgcttgacgaggtggaa
ctgtcgcttttggacatgggtcgcgtgaacaaggacggcgagcccattcgtctggggcag
acgatggcgaagaagcttgttgccgccatcgacgcaagtcgcggccgcgccttcgctcgc
gcgctgtttggcctggggatgcgccacgtgggcaaaaccattgccgagcttctggctggg
gcatacccgtcgatcgatgcactcatggccgcgagcgaagaggacctcgctgcgatcgac
ggcgtgggtccgaagattgcccacagcgtgtatctgttcctgcgtacacccgacaacgtg
gccgttatcgagcgcttgcgcaaacgcggcgtcgccttggctgatgaggcggtcgaagag
ggcgagcaactgccgcagacgctggagggtcttacgttcgtgctgaccggaagccttgtg
gaaagcggcatgacgcgcgacgaggccagcgcggccctgaaggctcgcggtgcgaaggtg
tccggcagcgtgtcgaagaagacgaactatgtcgtggcgggtgaagctgctggtagcaag
tacgacaaggctatcgcgctcggcgtgcctgttctcgacgaggctgcgctgctgcgcatt
ctcgaaaccggtgaggtgccggaagcgcctgctgaatag
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integrated database retrieval system
