Filifactor alocis: HMPREF0389_00071
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Entry
HMPREF0389_00071 CDS
T01663
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
faa
Filifactor alocis
Pathway
faa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
faa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HMPREF0389_00071 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
faa03400
]
HMPREF0389_00071 (nth)
Enzymes [BR:
faa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HMPREF0389_00071 (nth)
DNA repair and recombination proteins [BR:
faa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HMPREF0389_00071 (nth)
Prokaryotic type
HMPREF0389_00071 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
Ogg-HhH
RecR_HhH
HHH_5
EndIII_4Fe-2S
HHH_8
DUF2400
Motif
Other DBs
NCBI-ProteinID:
EFE28158
UniProt:
D6GR67
LinkDB
All DBs
Position
complement(638072..638707)
Genome browser
AA seq
211 aa
AA seq
DB search
MNKARKIVSVLQELYPEAKCELNYRTPYELLIATMLSAQSTDKRVNIITKDLFASYNTPD
KMVSLSEGELIELIRTIGFYNNKAKNILMTSHILLEKYGGEVPKTREELVKLPGVGRKTA
NVVISNAFGIPAFAVDTHVGRVTNRLGLTKSKNPNQIEIDVTSQLPKKLYTQAHHLFIFH
GRKCCKAIRPLCDSCPLTVNCTYYKQNKQER
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaagcaagaaaaatagtttctgttcttcaagagttgtatccggaagcaaagtgt
gagttgaattatcggacaccatatgagttgcttatcgcaacgatgttgagtgcacagtca
acagacaagcgtgttaatattattacaaaagatttatttgcgagctacaatacaccggac
aagatggtgtctctctcagaaggagagttgattgagcttattcgtacaatcggcttttac
aataataaagcgaaaaatatcttgatgacttctcatattttgttagaaaaatatggtgga
gaggttccgaaaacaagagaagaattggtaaaattaccgggagtcggcagaaaaactgca
aatgttgttatcagcaatgcttttggaattcctgcttttgctgtagatacacatgtcgga
agagttacaaataggttagggttgacaaaatccaaaaatccaaatcagattgagattgat
gtaacatcacagttaccaaaaaagctatacacacaagcacatcatttatttatttttcat
ggaagaaagtgttgtaaagcgattcggccactttgtgatagctgtccgttgacagtaaac
tgtacctattacaaacaaaataaacaagaaagatga
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