Ficedula albicollis (collared flycatcher): 101806016
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Entry
101806016 CDS
T02815
Symbol
MMP13
Name
(RefSeq) collagenase 3
KO
K07994
matrix metalloproteinase-13 (collagenase 3) [EC:3.4.24.-]
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
fab01002
]
101806016 (MMP13)
Peptidases and inhibitors [BR:
fab01002
]
Metallo peptidases
Family M10
101806016 (MMP13)
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GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_5
Reprolysin_4
MerR_2
DUF4953
Motif
Other DBs
NCBI-GeneID:
101806016
NCBI-ProteinID:
XP_005038273
UniProt:
U3JCA5
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Position
1:79535172..79542947
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AA seq
472 aa
AA seq
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MMQSGLSAVFVLLLGLSFCLTIPIPLEDSHEFTEKDLQFAERYLRTHYDLHPNPAGIMRK
SGNTVAAKLREMQAFFGLQVTGKLDEETYELMQKPRCGVPDVGEYNFFPRKLKWSKMNLT
YRIMNYTSDLRRNEVERAFKKAFKVWSDVTPLNFTRIRSGVADIMISFGTKEHGDFYPFD
GPSGLLAHAFPPGPDYGGDAHFDDDEVWSDDSKGYNLFLVAAHEFGHSLGLEHSRDPGAL
MFPIYTYTGKTGFVLPDDDVQGIQELYGAGDKDPNPKHPKTPDKCDVELSLDAITELRGE
MLVFKDRFFWRLHPQMVEAELVLLKSFWPELPNKIDAAYENPIKDLVFMFKGKKVWALNG
YDIVEDFPKKIYEMGFPKEMKRIDAAVHVKDTAKTLFFTGNKYWSYDEEAEVMEEGYPRL
IEEEFPGIGDKVDAVYERNGYLYFFNGPLQFEYSIWSQRIVRVLHTNSLFWC
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaatcaggactttcagctgttttcgttctcttgttgggtttgtcattttgcctg
acaatccctattccccttgaagacagccatgaattcacagaaaaggacctccagtttgca
gagcgctatctcaggactcactatgatctccatccaaatcctgctggcataatgaggaag
agtggaaacacagtggcagctaaacttcgggaaatgcaagctttttttggcttgcaggtg
acaggcaaactagatgaagaaacatatgagctgatgcagaaaccaagatgtggtgtcccg
gatgtgggggaatataactttttccctagaaaactcaaatggtcaaaaatgaatttgaca
tacagaattatgaattacacttcagatctgagacgtaatgaagtagagagagctttcaaa
aaggcatttaaagtttggtctgatgtgacaccactgaacttcaccagaatacgaagtgga
gtagctgatatcatgatctcctttggaaccaaagaacatggtgacttttacccttttgat
ggaccctctggattactggcacatgcttttccccctggcccagactatggaggagatgct
cattttgatgatgatgaagtttggtcagatgattctaaaggctataacttgtttcttgtt
gctgcccatgaatttggtcattcactgggacttgaacactctagagaccctggagctttg
atgttcccaatctacacatacactggaaaaactggttttgtgcttcctgatgatgatgtg
caagggatccaagagctctatggtgctggagacaaagatcccaacccaaaacatcccaaa
acacccgataaatgtgatgtagaattatcacttgatgcaataacagaacttcggggagaa
atgctggtcttcaaggacaggtttttctggcgacttcaccctcagatggttgaggcagaa
ctggtgttacttaagtccttttggccagagcttccaaataaaatagatgcagcttatgaa
aatcccatcaaagatcttgtgttcatgtttaaagggaagaaagtctgggctttgaatggc
tatgacatagttgaagacttccctaaaaagatatatgaaatgggattcccaaaagaaatg
aaaagaatagatgcagctgtccatgtcaaagacactgccaagactctcttttttactgga
aataagtactggagttatgatgaagaggcagaggttatggaagaaggctaccccaggctg
atagaggaagaattcccaggaattggtgacaaagtggatgcagtctatgaaagaaatggt
tacctctacttcttcaatggaccactgcagtttgaatatagcatctggagtcaaagaatt
gtccgtgtcctgcatactaactccctattttggtgctaa
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