Ficedula albicollis (collared flycatcher): 101809660
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Entry
101809660 CDS
T02815
Symbol
LTBP1
Name
(RefSeq) latent transforming growth factor beta binding protein 1
KO
K19559
latent transforming growth factor beta binding protein 1
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
101809660 (LTBP1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
fab04990
]
101809660 (LTBP1)
Domain-containing proteins not elsewhere classified [BR:
fab04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
101809660 (LTBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
EGF_3
hEGF
FXa_inhibition
EGF_MSP1_1
Plasmod_Pvs28
EGF_2
Motif
Other DBs
NCBI-GeneID:
101809660
NCBI-ProteinID:
XP_005043367
LinkDB
All DBs
Position
3:36420377..36611618
Genome browser
AA seq
1663 aa
AA seq
DB search
MGRIRWGFLLLAAWALLSRGLAASEKGRLRRITYVLQPGRGGSSGSRQQRPTLLGREQQQ
QRTFNVQLNARYGGGPPERTRRRSKPGSAAVQLRLGPAGQGHPNSAAHASSFAKPARFSP
RLKAPPGPHGNSKIGTPPPPPPPPPPPPRVNVCGGQCCHGWSKATGSQRCIKPNCAPPCQ
NGGMCLRPQLCVCKPGTKGSSCEDTVVQDTSSTGGRSPAVPPWPIPQQAAQQTFSQKVQV
PPKPGPVAQMAFTIKQKPPVGLTQQMQPQMIPLSSQTLMMNLHHGQTQEYVIKPKYYPVK
KVISGEQSTEGSLPLRLGQDQPASPLRLGNHTGRIKVVFTPSICKVTCTKGNCQNNCEKG
NTTTLISENGHAADTLTATNFRVVICHLPCMNGGQCSSRDKCQCPPNYTGKLCQIPVQTA
SSQKLYHHPQQVNKAVGSQVIHSTHTLPLTMSGQQGVKVKFPPNIVNIHVKHPPEASVQI
HQVSRIDSTSTGQKAKVPQPVHPQVSYQGLPYQKTQKGHTTYTNQQPIPHMFPVSVKTQL
GRCFQETVGTQCGKALPGLSKQEDCCGTVGTSWGFNKCQKCPKKPSYHGYGPMMECPQGY
KRINATFCQDINECQLQGVCPNGECLNTMGSYRCTCKMGFVPDPTLSRCIPDNPVVAEEK
GPCYRFVSAGKQCMHPLSVQLSKQLCCCSVGKAWGPHCEKCPLPGTAAFKEICPGGMGYT
VSGPHRNKLYHHPAVRVQPPAIGKTPITQPVAKGTSPPPLPAKEEPVEALTFSQKSETEM
AVQEVATAAPDQELASIDQEKQPYLEPGQPQLSPGISTINLHPQFPVVIEKTSPPLPVEV
APEVSTSSASQVIAPTQVTEINECTVNPDICGAGHCVNLPVGYTCICYKGFKLNDQQTKC
IDINECNQAPHLCSLGRCENTEGSFLCICQAGFMASEDGTDCVDFDECSRPHTCGEGFCI
NTHGSYRCEYCDSGYQMNRRGECEDIDECLTPTTCPDAQCLNAPGSYQCIPCRVGFRGWN
GQCHDINECQYGHHCANGRCENTEGSFRCICAPGFKLSASKDQCEDINECQQRSVCTNGR
CRNTEGSFRCICSQGYSLSSTGDQCEDVDECLQDSNVCLRGSCINTEGSYKCTCPDGFQQ
IANRGCQDINECERSDLCSPHGECLNTDGSYQCICERGFSVSADGRTCEDVDECTNGTVC
GSHGFCENMDGSYRCLCYQGYQDTQDGQGCTDVNECEMLSGVCGEALCENVDGSFLCLCS
DENQEYDPMTGQCRFRTSPEMPVEADQQEDGKKECYYNLNDANFCDNVLTSNVTKQECCC
TLGAGWGDNCEIFPCPVIGTAEFTDLCPEGKGFIPSGDSSYGLLAQNYKDADECQLFGQE
ICKNGFCLNTQPGYECYCKQGTYYDPVKLQCFDTDECQDPNSCIDGQCINTEGSYNCFCT
HPMVLDATEKRCIRPADSSEQTEEAEVYQDLCWQHLSDDFVCSRPLVGKQTTYTECCCLY
GEAWGMQCALCPMKESEDYAQLCNIPVPGSRRPYGQDALVDFEEHYTPETNPYFVEDRFL
NSFEELQAEECGILNGCENGRCVRVQEGYTCDCFDGYHLDMAKMTCVDVNECNELNNRMS
LCKNAKCINTEGSYKCLCLPGYVPSDKPNYCTPLNSEPDSELE
NT seq
4992 nt
NT seq
+upstream
nt +downstream
nt
atgggtcggatcagatggggcttcctcctcctcgctgcctgggcacttttgtcacgaggg
ctcgcagcctccgaaaagggcaggctaaggaggatcacgtacgtgctgcagcccggccgg
gggggctcctctggcagccggcagcagcgcccgacgctcctcgggagggagcagcagcag
cagcgcaccttcaatgtgcagctgaacgcgcgctacggcggcggccccccggagcggacc
cggcggaggagcaagccgggcagcgccgccgtgcagctccgcctgggccccgccggccag
ggccaccccaactccgccgctcacgcctcctccttcgccaagccggcccgcttcagcccg
cgcctcaaggcgccgccgggcccccacggcaacagcaagatcggaacccccccccccccc
ccccccccccccccccccccccccagggtcaatgtgtgcggcgggcagtgctgccacggc
tggagcaaggccacgggctcccagcgctgcatcaaacctaactgtgcaccaccgtgccaa
aatggagggatgtgcctgcgacctcagctgtgtgtgtgtaagccaggaacaaagggtagc
tcctgtgaggatacagtcgtgcaggacacctcttccactggaggccggagccccgctgtt
cccccgtggcccatcccccagcaggctgcccagcagaccttctctcagaaggtgcaggtc
ccaccaaagcctggccctgtggctcagatggcattcacaatcaagcagaagcctcctgtt
ggcttaactcagcagatgcaaccacagatgatacccctttcatctcagacactaatgatg
aatcttcatcatggccaaacacaagaatatgtgattaagcccaaatactatccagtaaaa
aaagtgatttcaggagagcagtccactgagggctcattacccctgagactgggccaggat
caacctgcatcacctttgcgcttgggaaatcacactggtcgcatcaaggtggtctttaca
cccagcatctgcaaagtgacttgtaccaaaggcaactgtcagaacaactgtgagaaggga
aatacaaccaccctcatcagtgaaaacggccacgctgctgacactctgacagccaccaac
ttccgagtagttatttgccacctaccatgcatgaatggaggccagtgtagctctagagat
aaatgccagtgccctcctaattacactggtaaactttgtcagattcctgtgcagactgcc
agttctcaaaaactctaccatcacccgcaacaggtgaacaaggctgtaggatcacaagtt
atccactctactcatactttaccactgacaatgtctggacaacaaggtgtaaaagtgaag
ttccctcctaacatagtgaatatccatgtgaaacatccccctgaagcctcagttcagatc
catcaagtgtcaaggattgacagcacatcaacaggacaaaaagcgaaagtacctcagcca
gtccatccacaggtctcttaccaaggtcttccgtatcagaagacccagaaaggacataca
acttacacaaatcaacaacccattcctcatatgtttcctgtttcagttaaaactcagctt
gggcgctgctttcaggagactgttgggacacagtgtggcaaagcacttcctggcctttcc
aagcaagaagactgctgtggaactgtgggtacttcctggggttttaacaaatgccagaaa
tgtcccaagaagccatcttaccatggatatggtcctatgatggaatgcccgcagggctac
aagagaatcaatgctacattttgtcaagatatcaatgagtgtcagttacagggagtatgt
cctaatggtgaatgcttgaataccatgggcagctacagatgtacctgcaaaatgggattt
gtgccagatcctaccctctcaagatgcatacctgataaccctgtagttgctgaagagaaa
ggaccctgctaccggtttgtcagtgcaggaaagcaatgcatgcatcctctctctgttcag
ctcagcaagcagctttgctgttgcagtgttggcaaagcctggggcccacactgtgagaag
tgtcccctcccaggaacagctgcttttaaggaaatctgccctggtggaatgggttatacg
gtttctggccctcacagaaacaagctatatcatcaccctgcagttagagtacagccacct
gccattggcaagaccccgattactcaacctgttgctaaaggtacttctcctccacctctc
ccagcaaaggaagagccagtggaggcactgaccttctcacagaaaagtgagactgagatg
gctgtacaagaagtggcaactgcagctcctgatcaggaattagcttccattgatcaagaa
aagcagccttatctagagcctgggcagcctcagctttctcctggaatttcaacaattaac
ctgcatccacagtttccagtagtgattgagaaaacatcccctcctttgcctgttgaagtt
gctcccgaagtctctacttcaagtgcaagtcaggttattgcacctactcaagttacagaa
atcaacgaatgtacagttaatcctgacatctgtggagcaggacactgtgttaatttgcct
gtgggatacacttgcatctgctacaaggggttcaaacttaatgatcagcagacaaagtgc
attgatattaatgagtgtaaccaggcaccacatctctgttcccttggacgttgtgaaaat
acagaaggaagtttcctatgtatttgccaagctggattcatggccagtgaagatggaacc
gactgcgttgattttgatgaatgttcaagacctcacacttgtggagaaggcttttgtata
aacactcatggctcatacagatgtgaatattgtgatagtggataccaaatgaacaggaga
ggggaatgtgaagacatcgatgaatgcctgactccaactacctgtccagatgcacaatgc
cttaatgctcctggctcttaccagtgcattccttgcagagtggggttcagaggctggaat
ggacagtgccatgatataaatgaatgtcagtatggccatcactgtgcaaacggacgttgt
gaaaatacagagggatccttcaggtgtatttgtgccccgggtttcaaactctctgcgtca
aaggatcagtgtgaagatattaacgaatgccagcagcggtcagtctgtaccaacggacgc
tgcaggaacacagaaggatctttcagatgtatctgtagccaaggctattccttatcatct
actggagatcagtgtgaagatgttgacgaatgccttcaagacagcaatgtttgcctaaga
ggaagctgcataaacactgaagggtcttacaaatgcacttgtccagatggtttccagcag
atagcaaataggggatgtcaagatatcaatgaatgtgagagatctgacctctgctcacca
cacggagagtgtctgaacacggatggttcctaccagtgcatatgtgagcggggcttttct
gtgtctgcagatggccgaacatgtgaagatgtggacgaatgtacgaacggcacggtgtgt
ggcagtcacgggttctgtgaaaacatggatggctcctaccgctgcctctgttaccaaggg
taccaggacacacaggatgggcaaggctgtacagatgtgaatgaatgtgaaatgttgagt
ggagtatgtggtgaagccctctgtgaaaacgttgatggttctttcctgtgtctgtgctct
gatgaaaaccaggagtacgatccaatgaccggacagtgtcgcttccgtacctcaccagaa
atgccagtagaggctgatcaacaagaagatggaaagaaggagtgctactacaatctgaat
gatgctaatttctgtgacaacgtgcttacatccaatgtaaccaagcaagaatgctgctgt
accttgggtgctggctggggtgataactgtgaaatcttcccatgccctgtcattggaact
gctgaatttactgatttgtgtcctgaaggaaaaggtttcattccctctggagattcatct
tacgggcttcttgctcagaattacaaagatgctgatgaatgccaactctttggacaagaa
atctgtaagaacggcttctgtttgaatacacagccaggttatgagtgctactgcaaacaa
ggcacatactatgaccctgttaagctccagtgctttgacacggatgaatgtcaggaccca
aacagctgtattgatggccagtgcattaacacagaaggatcttacaactgtttctgtaca
cacccaatggttttggacgcaacagaaaagcggtgcatcagaccagcagattcgagtgaa
caaactgaagaagctgaggtctaccaggacctttgctggcagcacctaagtgatgatttt
gtctgcagtcggcccctggttgggaagcagacgacgtacacggagtgctgctgcctgtac
ggggaagcctggggcatgcagtgcgcgctgtgtcccatgaaggagtcggaggattacgcc
cagctgtgcaacattcccgtcccaggatctcggcggccatatggacaggatgctttggtt
gacttcgaggagcactacaccccagaaaccaacccgtactttgtcgaagaccgtttcctg
aacagctttgaggagctacaagcagaggaatgtggtattctgaatggatgtgaaaatggc
cgatgtgtgagagtccaggaaggctacacctgtgactgctttgatggttatcacctggac
atggccaaaatgacttgtgttgatgtgaatgagtgcaacgagctgaacaataggatgtcg
ctctgcaagaatgccaaatgcattaacacggaagggtcatacaagtgtttgtgtctccct
ggctacgtgccttcagacaagccaaactactgcacaccactgaactcagaaccagacagt
gaactggagtag
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integrated database retrieval system
