Ficedula albicollis (collared flycatcher): 101809827
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Entry
101809827 CDS
T02815
Symbol
CZH5orf42
Name
(RefSeq) chromosome Z open reading frame, human C5orf42
KO
K22859
protein JBTS17
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
fab03037
]
101809827 (CZH5orf42)
Cilium and associated proteins [BR:
fab03037
]
Primary cilia and associated proteins
Ciliogenesis and planar polarity effectors (CPLANE) complex
101809827 (CZH5orf42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Joubert
Motif
Other DBs
NCBI-GeneID:
101809827
NCBI-ProteinID:
XP_016160307
LinkDB
All DBs
Position
Z:complement(12001642..12063036)
Genome browser
AA seq
3201 aa
AA seq
DB search
MEIKLDVLVSMCIKQRKPWPRISWVGQEKEAVFLLDGKQINEINLTSGKKKKKIPLLQSL
LKNVVVLTTSGNAAWLAGILATGELFLWNRDQDCLKIVPAVEESKKVVAAAQECLMRLYL
YVSGDGRKVLLTTPTACAFLWESTEHENTPSDKNSPSGHWTQILPVGSVILPSTEEKEVG
VDAAFIQNEVLGDCCLCSFVFYSDECLVLTFLVLRWHENTFKNVSSLPYQIQWAQQTCSL
VNLVPQCVSVKSRGALLCAFARDGLLLAVAVNQTDPKATQVLFLNTLNFVTVSGSLKGCS
SKNSMTSSRFIRSYWVGDMSWTPDSLFLACMLKRGCLILLTCMGELVTLIASGCSVEFGP
AQFIPFHPLITYRQHHSCCRDSSQSLGSSDSERDILRQRFSVASHPRLPYLIVSDGYMIT
LLRFPSNFSPSGFIRSLLLDSTQKLENIRQNLLNFRSKGRSRYLRSLLSLKASLLKQVQN
QSSIFSTIPRFLEEDATEINDKTMDLLDHEEESDNEKQFYNSPSSLYNQRIYSSVGKADE
GYLEFASMFDTIHAEDDFGEKDKSSLELYSIQKNLLGAWQIGISKNMEEKDALLNYTVNC
IIHFFNIVQFVKCTLLNQDTSLNKSMKNTQWMYCVLKYFQQCLTVLYWHSRASVTGHVAK
LTLETLKLMLIQQQDQLFSKNLLACFCLLKMVSHTLSRVCVLQYENFFVSPDSNILVELD
SLTVPVFLVLDDDTTQQFSSLKSLLREYPRVNHDAKSEKRLTVLWRLLYKKVIWYQLQLK
RKVNKNAEEASVVSLLLSHIQATIQSSGVTLEQHLKINSVSGEEQFLLGSYRESLDIWKR
SLCELKTKGGKRAYFLQRRYYLAILFCHLYQYNLCEAQGLCDHLVREILRRSQLSTSQME
EFSDTKYFQHELWMVTSIHTDTAMAVIRSMARFMAAYFTKQLLYIFPPHNVDILHPLHIK
QDLPPRVIPLQHCLVARAVRDQNLSSVWTAEYALDLFFIGGLIPEAVWLAHTLGDWKLSI
SIGLAYQLYCQNSDELSRMKKPECHLPLSLLPMQTFQEKLQSLLGQPATSETSGHIKYKK
FTDPIEEEDADVIYSSMQELLKAAVMADVDILSETFQLLMDSAKDLCRKFYGLVPVGLCL
PAPPLYCPQPASVSEEDSDDILLKMEKEARQKVSGVLQRIILLFRAGHCSFSAAQWYITQ
LKWARKVMQKIRVKGSLPLLSPFPETLLRYCNFRTVLHGSTSSGAHQFDDITCKILGWFR
EFCALCWMFHVREKLSDSCRRYQTARENMSNVKDLNENGYDDYTVEHCLNAVEWACRMLP
FCRFMNAEEFVQDVILSLLGELPPVEKVAEIFVKAFPNPEDIRVSLRDKYHGLQQRLRHS
TVKVGPESEEIMSVVIQAAEEVRKKALRRVVKNIGPIEINIWEPVEERASNDEEHCCDRV
SLGTSLSTSTLTDFGNPQIYSDADTADTLSDALRTEESRAQTPSFPRENELQQQRERGSK
NTTHKIKAPNHKTKHKDRVCRRVMLNQCNLPVVGAWEFERDDDEYVRFLEVFLSYVLERD
LIKYSDLGIPFLTSFSGLLQEHELNSLFFDVHTTLKRRQNKTRSQSVFRAGSCYTVTLAS
CDPEKVSACKENKNTLKKPTIVQSVERTTESSVHNLTKGLKEGLFGLKYKSIYRAQTDNL
TVALTSQTFPSHTSSTLQTEAISKYIYKTLDVVGIVPAEELPIELMGKLSNISKLLEWMI
RWSDKRLLCGSNKRDSLEETLPMLHVKTSSAAILTSFWLLEQLYGDRSQTKSIKCKHPDD
QYLKEMASLSEAQSRTEEESSMDEGSSAVANSPVDVQIIQIYDNLCERELGMSAKSKYFY
KKEINHGNNSVPHITEDLNKVGPFVQQELDVISEQEFFEEPYETSKISNSSVEIRPVEHQ
REQDAIPWDSPKQIPEEASVCSPEVKVAISAADSAQEDQIMEKTKEEKAEQNIMTEVVTS
TLSHSFTLKQDAEIPSSADISVSDSQPSQTAVSTLSSLASHTSVCAKKQEVKEEVPREEK
PDTSETVRQMLQDEMLKLVQLQQINFMSLMQIVQSSFTNVPNVQQILQQHQLVHLARSQA
AHTAESSASPKTQVPTQEEKGKTGEESSVFQPRKGVEYESSNGQIKNPLDMSASLTLFES
SSKETGLMPPSQDLHSSVPTKPLHLLAPPSGIQKKIRLIPVEKKISCSNGFPLLKLESSY
HVKTSFLHPTEMSSAFAKPPPVPRVAWSLSDSLWNHQSSYIPKKSKIEDFHRSRYNTENP
RQMHEEKERWAEAVRKGPPKHLNPDLYEGQQEDLPQPHFPANVNVFKGPTIQNLAGIPLL
HLQLDPVPRAPPAVRQPVPTTLIPVKPATKNADFRETPRDTGISLLQINLPQQKKVPKLI
PLQDLIAFEQRHRHHSVPSTSFAQDQTKPVQLLRTEVEPFELRDVQSNRKKSKKRRCKKQ
LKEQEDKKKPNVSFRPDDSIFSISDTAVVTESETGDHKPESTSSVQDGFFISRDAVEKAS
AISADLHFLASVGKKPAETQDASTNTNPVLSSYQDQGISGGNEVSKVQDNELVTSVLASE
SSSSSVILLPNMYLNLSFPTELNEKPSPSFLSDAPELHNREYISVTDIEDRDILSNLPII
PESAEEIAAAQQDEKLEIPSPAELHHTAASVTSAVPPGGLQKQDDRQKKVSSKLQKKDKS
DFATDIVTWNIPHEDGGNLPSSGLPSKVIEKEYFSTKQKEMDMQLQTLQNIVENMEQDFR
NSRILVKLIEDFEMAADSDLGARPAVSEAGGDSEHHLTGMIFEDVIDDQKEISNLEYPMR
SSTAVDAHSPASAALASNSPSGLKSRSGTHLCRDLCPGSLEDPLQITGPSDVTDIVNDRV
VESSTSLLELDLARTKTKDISRVLDSASGHSQRTEKERKEIQTWMKRKQKERMREYLKKL
DEQRQKEHHPFNLGKNTHHHPTSKDIRIFQKKKEEKDKALLSEHHRIRISQALSLMNEML
SETVPSPASDHRALSSTRSPQAYRRSNVASSPGGHLDSPVLAERSRIAAKPGFGQKVQRF
TPDLGLTQSRGNTCMILQKSTSRRQLRNATNCPVDSRHSAECRVSRRSTQKPPQVTTAVQ
TEGVDLDTDRDVVSPWTVPDDIQRILQETHDSMFQASAAHSLSFSPLGSTNTDSVSESTG
SILSKLDWNAVEAMIADVEDK
NT seq
9606 nt
NT seq
+upstream
nt +downstream
nt
atggagattaagctagatgtgctcgtctctatgtgtatcaagcaaagaaaaccatggcct
cgcatatcatgggttggacaggaaaaagaggctgtttttcttctagatggtaaacagata
aatgaaattaacctgacatcggggaagaaaaagaagaaaatccctttgctacagtcattg
ttgaaaaatgtggttgtcttaacaacatcaggaaatgctgcttggttggcaggaatactt
gcaacaggagagctgtttctttggaacagagatcaggactgcttaaaaattgtgccagca
gttgaagagtccaagaaagtagtagcagcagcacaagagtgtttaatgaggttatacttg
tatgtatctggagatggcagaaaggtgctgttaactactcctacagcatgtgccttcttg
tgggagagcacagaacatgaaaatacaccttctgataaaaactctccttctgggcattgg
acacaaattttacctgttggatcagtcatattaccttctactgaagaaaaagaagttgga
gtggatgctgctttcatacaaaatgaggtactaggtgattgctgtttatgttcttttgta
ttttactctgacgagtgtttggtactcacatttttggttcttcgatggcatgaaaatacc
tttaaaaatgttagttctttgccataccagatccagtgggcacaacagacttgttctctt
gttaatttggttcctcagtgtgtgtctgtaaagtccagaggagctctgctgtgtgcattt
gcaagagatggacttctacttgcagtagctgtaaatcaaactgatccaaaggcaactcag
gttttgtttttaaacaccttgaattttgtaactgtttcgggtagccttaaaggctgtagt
agcaagaatagcatgacctcatccaggttcatcagatcgtactgggttggcgatatgagt
tggactcctgatagccttttcttggcttgcatgttaaaacgtggatgtttgatcttattg
acgtgtatgggggaattggtgaccttaattgcttctggatgctctgtggaatttggacca
gcacaatttattccatttcatccactaataacatacagacagcaccactcttgttgtcga
gattccagccagtctcttggttcttcagattctgaacgtgacatcttgagacagagattc
tctgttgcttcacatccaagactaccctacctcattgtctctgatggatacatgataaca
ctgctaagatttcctagcaacttttcaccatcaggatttataagatcccttttacttgat
tcaacccaaaagcttgaaaacatccgtcagaatttgttgaacttcaggagtaaagggaga
tctcggtacttacgatcgctgctgtctttaaaagctagtcttttaaaacaagtccaaaac
caaagttctatcttttccactattccaagattcctggaggaggacgcaacagaaattaat
gacaagaccatggatttactggaccatgaagaagaatcagataatgaaaagcagttttac
aatagcccttccagtttatataaccaaagaatctattcatctgttggtaaagctgatgaa
ggctacttagaatttgcatcaatgtttgataccatccatgcagaagatgattttggagag
aaagataaatcatcattggaactatattccattcagaaaaacctccttggtgcatggcag
atagggatttcaaaaaatatggaagagaaagatgcattactgaattacacagtgaattgc
attatccattttttcaacattgttcagtttgtgaaatgtactttgctaaaccaggataca
tctttaaacaagtctatgaagaatactcaatggatgtattgtgtcctgaaatattttcag
cagtgtttgactgtcttgtactggcattcaagagccagtgtcactgggcatgtggcaaag
ctgacattagaaactttaaaactgatgctcatacagcaacaagatcagttgttctcaaaa
aaccttttggcatgcttctgtcttttgaaaatggtttctcacaccctaagcagagtgtgt
gttctacagtacgagaatttttttgtgtctcctgacagtaatattcttgtggaacttgac
tccctcactgtgcctgttttcttagttcttgatgatgatactactcagcagttcagctca
ctgaaatctctgcttagagaatatcctcgagtaaaccatgatgcaaaatcagaaaaaagg
ttgactgtactatggcgactattgtataaaaaagtgatttggtatcagctgcagctgaaa
agaaaagtgaacaagaatgcagaagaggcttctgttgtctcattgcttttaagtcatata
caagcaaccatccagtcttcaggagtgacattagaacaacatctgaagattaattctgta
tctggcgaggagcagttccttttaggctcatacagagaatctctggacatttggaaaaga
tctctttgtgaactcaagacaaaaggaggaaaaagagcatattttcttcagcgcagatac
tatcttgcaattctgttttgtcacctgtatcagtataacctgtgtgaggctcagggactc
tgtgatcatctggtaagagagattctgaggcgatcacagctctccacaagtcagatggaa
gaattttctgataccaagtattttcagcatgaactatggatggtaaccagcattcatact
gacactgccatggctgtgattcgatccatggcacgattcatggctgcttatttcacaaag
cagctgctctatatctttcccccccacaatgttgacatccttcacccacttcacatcaaa
caagacttacctccccgtgtcattccactgcaacactgtttggttgccagagctgtcagg
gaccagaacctttcatctgtgtggacagctgaatatgctcttgatttgttctttattggt
ggactcattccagaggctgtgtggttagcacacacacttggggactggaagctctctatt
tcaattggtctggcctaccagctgtattgtcagaactctgatgagctctcaagaatgaaa
aaaccagagtgtcacctgccattgagcttattaccaatgcagacttttcaggaaaagtta
cagtctttgttaggacagccagcaacttctgaaacatcaggacatattaaatacaagaag
ttcacagatcccattgaagaggaagatgcagatgttatttacagttcaatgcaggaacta
ctgaaagcagctgttatggcagatgttgatattctctcagagacatttcagcttttgatg
gattctgccaaggatctttgcagaaagttttatggtttggttccagttgggctctgtctt
ccagcaccaccattgtactgtcctcaaccagcttctgtcagtgaagaagacagcgatgac
attcttttaaaaatggagaaagaagcccgccagaaagtgtcgggagttcttcagcgaatt
atcttgctcttccgggctggtcattgttctttctctgcagcacagtggtatattacacaa
ctgaagtgggctagaaaagttatgcagaaaattcgagtgaagggttctcttcctttgctg
agtccattcccagagactttgcttcgttactgcaatttccgcaccgttctccatggatct
acatcttctggagcccatcagtttgatgacattacctgtaaaattttaggttggttcaga
gagttctgtgcattatgttggatgtttcatgttcgtgaaaaattatctgacagctgtagg
cggtaccaaacggcaagggaaaatatgagcaatgtcaaggatctgaatgagaacggatat
gatgactacacagttgagcattgtctgaatgcagtggagtgggcttgtcgaatgcttcct
ttctgcagattcatgaatgctgaagaatttgttcaagatgtaattttgagtctgcttgga
gaattgccaccagtagaaaaggtggcagagatttttgtaaaggcatttcctaatcctgaa
gatataagagtttcactaagagataaatatcatggacttcagcagcgactcagacacagt
actgttaaagtaggtcctgaaagtgaagaaattatgtctgttgttatacaggctgctgaa
gaagtgaggaagaaggccttgagacgtgtagtaaagaacataggccctatagaaattaat
atatgggagccagtagaagagagagcatcaaatgatgaggaacactgttgtgacagagtc
tcactaggcactagtctaagcacaagcacacttactgattttgggaatcctcagatatat
agtgatgcagacacggcagacacactttctgatgctttgcgtactgaagaatcaagagct
caaacaccttcattcccaagggaaaatgaactccagcaacaaagggaaagaggtagcaaa
aataccacacacaagataaaagctcctaaccataaaacaaaacataaagacagagtgtgt
aggagagtcatgcttaatcaatgtaatttgcctgtagttggtgcgtgggaatttgaacgt
gatgatgatgaatatgttagatttttagaagtctttctgagttatgttcttgagagagat
ctgataaagtacagtgaccttggaattccatttcttactagcttttctgggctgcttcaa
gaacatgaattgaattcactcttttttgatgttcacacaacactaaaacgtagacaaaac
aaaactagaagtcaaagtgtttttagagcggggtcttgctatactgtgaccctggcatct
tgtgatcctgaaaaagtgtctgcctgtaaagaaaacaaaaatactttgaaaaaaccaaca
attgtacagtctgttgaacggaccacagaatcttctgtacataatctaacaaaaggactt
aaagaaggtttatttggtttaaaatacaagtcaatatacagagctcagactgacaatctg
actgttgcactaacaagccagacctttcctagccatacttcctctaccctgcaaactgag
gcaatttctaaatacatttacaaaactcttgatgtagttggtattgtaccagcagaagaa
ctgcctatagaattgatgggcaaattgagcaatatttcaaaattgctggagtggatgatc
cgatggtctgataaaagactgctctgtggttccaataaacgagattccttagaagagact
ctcccaatgctacatgtgaaaacatcatcggcagctatccttacatctttttggttgtta
gaacagttatatggagacagatctcaaacaaagagcataaaatgtaagcatccagatgat
caatatctgaaagaaatggcatctctatcagaagcccagtctagaacagaggaagaaagc
agtatggatgaaggctcttctgctgtggccaattctcctgttgatgtccagattatacaa
atctatgataatctttgtgaaagggagttgggaatgtctgcaaagtcaaaatatttttat
aagaaggaaattaatcatggtaataattctgtgcctcatataactgaagacctgaataaa
gtgggaccatttgttcagcaggagttggatgtaatatcagaacaagagttctttgaggag
ccatatgaaacttcaaagatctccaatagctctgtcgagatcagacctgtagaacatcaa
agagaacaggatgctatcccatgggactctcccaagcaaatccctgaagaggccagcgtc
tgctctcctgaagtgaaggttgccatttcagctgcagatagtgctcaagaagatcaaatc
atggaaaaaacgaaggaagaaaaggctgaacagaatattatgactgaggttgttactagc
actctttcccactcattcactttaaaacaagatgcagaaattcctagcagtgcagacatt
tctgtaagtgattctcagccttctcagactgctgtgtcaactctgtcaagtcttgcctcc
catacttctgtttgtgcaaagaagcaagaagtcaaggaagaagtccctagagaagagaaa
ccagacacatcagaaactgtcaggcagatgctgcaagatgaaatgcttaaattagttcag
ctccagcagatcaacttcatgagtttaatgcaaatagtgcagtcatcctttaccaatgtg
ccaaatgtgcaacaaatattacagcagcatcaattggttcatctagccaggagccaggct
gcacacactgctgaaagcagtgcttctccaaagacacaagtgcccactcaagaagaaaaa
ggaaaaactggtgaagagagctctgtttttcagccaaggaagggggtagaatatgaaagc
agcaatggtcaaataaaaaatcctctggatatgagtgcttctttgacattatttgaaagc
agcagcaaggaaacaggattaatgccaccatcccaagatctgcattcttcagtgcctact
aaaccacttcatctcctagctcctccctcaggcatccagaaaaaaattaggcttatccct
gttgaaaaaaaaattagttgctctaatggatttcctttgcttaagcttgaatcaagttat
catgtcaaaacatcatttttgcatccaacagaaatgtcatcagcatttgccaaaccaccc
ccagtaccacgagtagcttggagcttatcagattccttatggaaccatcagtcatcatac
ataccaaaaaagagtaagatagaagatttccacaggagtagatataacactgagaatcca
agacaaatgcatgaggaaaaggagagatgggcagaagcagtgcgtaagggacctcccaaa
catctgaatccagatctgtacgaaggacagcaagaagatttacctcagcctcacttccct
gcaaatgtgaatgtgttcaaaggaccgaccattcagaacctggctggtattccactgttg
cacttgcaacttgacccagtacctagagctccaccagctgtaaggcagccagtccctact
actttaatacctgttaaacctgcaacaaagaatgctgactttagagaaacaccacgggat
acaggaatatcactacttcagattaatttacctcagcaaaagaaggtaccaaaactcatc
cctcttcaagatctcattgcatttgagcaacgccataggcatcattctgtgcccagtact
tcctttgcgcaagaccaaaccaaacctgtgcagctgctaagaactgaagttgaaccattt
gaacttagagatgtgcagagcaataggaaaaaaagtaaaaagaggcgttgtaagaagcaa
ctaaaagagcaggaggataagaagaaaccaaacgtgtccttccgtccagacgactccatc
ttcagtattagtgacacagcagtggttactgaatcagagactggggatcacaaaccagaa
tcaacatcttccgttcaagatggttttttcatctcaagggatgcagtggagaaagcaagt
gctatctcagcagatctacattttttggcttctgtaggaaaaaaaccagcagaaactcaa
gatgcaagtacaaatactaatccagtgctcagttcatatcaggatcagggaatcagtggt
ggaaatgaggtttccaaagttcaagacaatgagctggtcacgtctgttctggcatcagaa
tcatctagttcctctgtgatactactgccaaacatgtatttaaacctgagtttccccact
gaactgaatgagaaaccttcaccatcctttctgtcagatgcacccgagttgcataatcgg
gaatatatcagtgtgactgacattgaagacagagacatccttagcaatttgcccataata
cctgagtctgcagaagagatagctgctgcacagcaggatgagaagcttgaaattccatct
cctgccgaacttcatcacacagcagcttctgttactagtgccgttccacctgggggactg
cagaagcaagatgatcgtcagaaaaaagtatcaagcaagttgcaaaagaaggataagtca
gattttgctacagatattgtaacttggaacattccacatgaagatggaggaaatcttcct
tcatcagggcttccatccaaagtaattgaaaaagaatacttttccacaaagcagaaggaa
atggatatgcaattacagacactacagaacatagtagaaaatatggagcaagatttcaga
aatagcagaattttagtgaagctgatagaagattttgaaatggctgctgattcagacctt
ggtgctcgtcctgcagtctctgaagctggtggtgattcagaacatcatttgacaggcatg
atctttgaagatgttatagatgatcaaaaggagatctcaaacttggaatatcctatgcgc
agttctactgcagtggatgcacactctcctgcctctgcagccttggcttctaactctccc
agtggcctgaagtcacgttctggtactcacttatgcagagatctatgtcctggctcttta
gaagatcccctgcaaattactggtccaagtgatgttactgacattgtgaatgatcgtgtg
gtagaaagcagcacctctctgttggagctggaccttgcaagaactaagactaaggatatc
tctagggtccttgattctgcttctgggcattctcaaagaacagaaaaggagaggaaagag
atacaaacatggatgaaaagaaagcaaaaggaaagaatgagggagtatttgaagaaactg
gatgaacaaagacagaaagaacatcatccattcaatctgggaaagaatacgcatcatcat
cctacttcaaaggatattagaatcttccagaagaagaaagaagaaaaagacaaagccctg
ttgtctgagcatcacagaatcagaatatctcaggcactgtccctgatgaatgaaatgtta
tctgaaacagtgccatcaccagcaagtgatcacagggcattgtccagcacaaggtcacct
caagcttacagaaggagcaatgtggcatctagtccaggagggcatctggacagtcctgtt
ctggcagaaagaagcagaattgctgcaaaacctggctttggtcaaaaagtacaacgtttc
actccagatcttggtttaacacagtccagaggaaatacctgtatgatccttcagaaaagt
acctctagaagacaactgagaaacgctacaaactgtcctgttgattctagacactctgct
gagtgcagagttagcagaagatcaacacaaaagcctcctcaagttaccacagcagttcag
acagaaggtgttgatcttgacactgatcgagatgtggtgagtccttggactgtgcctgat
gatatccaaaggatacttcaagaaactcatgactccatgttccaggcctctgcagcgcac
agcttgagtttctctcctctcggcagtaccaacactgacagtgtttctgaaagcacaggg
agcatcctcagcaagctggactggaatgcagttgaggctatgatagcagatgtggaagac
aagtaa
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integrated database retrieval system
