Ficedula albicollis (collared flycatcher): 101809926
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Entry
101809926 CDS
T02815
Symbol
PDGFRB
Name
(RefSeq) platelet derived growth factor receptor beta
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab04010
MAPK signaling pathway
fab04020
Calcium signaling pathway
fab04510
Focal adhesion
fab04540
Gap junction
fab04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
101809926 (PDGFRB)
04020 Calcium signaling pathway
101809926 (PDGFRB)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101809926 (PDGFRB)
04540 Gap junction
101809926 (PDGFRB)
09142 Cell motility
04810 Regulation of actin cytoskeleton
101809926 (PDGFRB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
fab01001
]
101809926 (PDGFRB)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
fab04090
]
101809926 (PDGFRB)
Enzymes [BR:
fab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
101809926 (PDGFRB)
Protein kinases [BR:
fab01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
101809926 (PDGFRB)
CD molecules [BR:
fab04090
]
Proteins
101809926 (PDGFRB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
V-set
VEGFR-1-like_Ig-like
C2-set_2
VEGFR1-3_N_Ig-like
DUF4452
BACON_2
Motif
Other DBs
NCBI-GeneID:
101809926
NCBI-ProteinID:
XP_005053516
UniProt:
U3JZS6
LinkDB
All DBs
Position
13:6666597..6699190
Genome browser
AA seq
1093 aa
AA seq
DB search
MLCPTLKMCLWLLILTGLLEAALGDSRLHIEPRDAELVLSLHSTSSLLCYGDRELLWERE
GQPLAASLEHRDGVFVSNLTLRNVTGHHTGEYTCTYSPEQAPEPAERRALYIYVPDPSLV
FLPAVTSEEVFIFITGYTEAVIPCRVTNPQMQVTLYEKKVENPIPATYDPQQGFKGFFED
KTYFCRTFVDDQEVDSDTFYVYRIQVSSVNVSISAVQTVVRQGENVTVMCTVSGNELVNF
NWDYPRRQAGKAVEPVTDFLPGSTHEIRSILIIQNAELEDSGTYVCNVSEGYHEKTDRKD
ITVQVIERGFVHFHTHLPSTVYAEVHKSHTIQVEVEAYPQPSIVWLKNNKTLTMESSSEF
TITSRNLSETRYQTALVLVRVKQEEGGFYTIRASNEDDEQELSFHLQINVPAKVVDLKEN
SSASSGEQTVTCSAEGMPQPEISWSTCSDIKWCSTTGQPRRLLGNESAEMGVQTNASYLA
ERRLYRVNSTLQLLRLHQPLLLRCTVHNFLGTSSQDITLVPHALPFKVVIISVILALLVL
TVISLIILIVLWQKKPRYEIRWKVIESVSSDGHEYIYVDPMQLPYDSTWEVPRDKLVLGR
TLGSGAFGRVVEATAHGLSHSRSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNI
VNLLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQCCGDKARREAELYGNTPKEDRL
HSHLSMSVESDGGYMDMSKDDSLDYVPMSDMKGEVKYADIDSSNYGTPYELDSYSPSAPE
RTDRVTLINESPLLSYMDLVGFSFQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICD
FGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPY
PELPMNEQFYNAIKRGYRMSKPTHASDEIYNIMQKCWEEKFEIRPSFSQLVVLMGNLLVD
CYRKRYQQVDEEFMKSDHPAVVRTRPAVPVLNNARLAASSPSSSTLYTAVHQSGADNDYI
IPLPDPKPEASCDLPQEASISRASSMLNEANTSSTISCDSPLGLRPDEEQESDPQPGCQE
PSTGHQEVEESFL
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgccccactctcaagatgtgtctctggctcctcatcctcactggtctgctggag
gcagcgcttggggacagcaggctgcacatcgaacccagagacgctgagcttgtcctcagc
ctccacagcacctcctccctcctgtgctatggggacagagagctgctctgggaacgggag
gggcagcccctggccgcctcgctggagcacagggacggtgtctttgtcagcaatctcacc
ctcaggaacgtgacaggccatcacactggggagtacacgtgcacctacagccccgagcag
gctccagagccagcggagaggagagccctgtacatctacgttccagatccctccctggtt
ttcctccctgcagtcacctctgaagaggtcttcatcttcatcacgggctacacagaggct
gtcatcccgtgccgtgtgaccaacccacagatgcaggtcaccctctatgagaagaaggtg
gagaaccccatcccagctacatatgatccacaacaggggtttaaaggcttctttgaggat
aagacctatttctgccggacgtttgtggatgaccaggaggtggattcagacactttctac
gtctacaggatccaggtgtcgtccgtgaacgtctccatcagcgcagtgcagaccgtggtg
cgccagggagaaaacgtcaccgtgatgtgcaccgtgagcggcaacgagctggtcaacttc
aactgggactatccccgcaggcaggcagggaaggctgtggagccagtgactgacttcctg
cctggatccactcatgagatccgctccatcctcatcatccagaacgcagagctggaggac
agtgggacctatgtctgcaatgtctccgagggctaccatgagaaaacagacaggaaagac
atcactgtccaagtgatcgagcgtggctttgtgcacttccacacccacctgcccagcaca
gtgtatgctgaggtccacaagagccacaccatccaggtggaagtggaggcttatccccaa
cccagcattgtgtggctgaagaacaacaagacattgaccatggagagcagcagcgagttc
actatcaccagcaggaacctgtcagaaaccaggtaccagactgctctggtgctggtgcgg
gtgaagcaggaagaaggaggattttacaccattcgggcttccaatgaggatgatgagcag
gagctctccttccatctgcagataaatgtgccagccaaagtggtggatctcaaggagaac
agcagtgccagcagtggggagcagactgtaacgtgctctgctgagggcatgccccagcca
gagatcagctggtctacttgcagcgacatcaaatggtgcagcaccacgggccagcccagg
cggctgctggggaacgagtcggccgagatgggcgtgcagaccaacgcctcgtacctggcg
gagcggcggctctaccgcgtcaacagcaccctgcagctgctcaggctgcaccagcccctg
ctgctcaggtgcaccgtgcacaacttcctgggcaccagctcccaggacatcacgctggtc
ccacacgccttgccgttcaaggtggtcatcatttctgtcatcctggccttgctggtcctc
actgtgatctccctgatcatcctgatcgtgctgtggcagaagaaacctcgttatgagatc
cgctggaaggtgattgagtcagtcagctctgatgggcacgagtacatctatgtggatccc
atgcagctcccctatgactccacctgggaggtgcccagggacaagctggtgctaggacgc
actctcggctctggtgcctttggtcgtgtggtggaggcaacagcccatggcctgagccat
tcacgatccaccatgaaagtggcagtcaaaatgctcaagtccacagcccgcagcagtgag
aagcaagccctcatgtccgagctgaagatcatgagccacctgggacctcacctcaacatt
gtcaacttgctgggggcctgcaccaaaggaggacccatctacatcatcaccgagtactgc
cgctacggggacctggtggattacctgcaccgcaacaagcacaccttcctgcagtgctgc
ggggacaaggctcggcgggaggcggagctctacggcaacacccccaaggaggaccggctg
cacagccacctctccatgtctgtcgagagtgacgggggctacatggacatgagcaaggac
gactccctggactatgtgcccatgtctgacatgaagggggaagtcaagtatgctgacatc
gactcctccaactatggcaccccctatgagctggacagctactccccctcagctcctgaa
aggacagaccgggtgacactgataaatgagtctccactcctcagctacatggacttggtg
ggcttcagcttccaggtggccaatgggatggagttcctggcttccaaaaactgtgtgcac
cgtgacctggctgccaggaatgtcctcatctgtgaggggaagctggtgaagatctgtgac
tttggcctggcaagggacatcatgagggattccaactatatctccaaaggcagtaccttc
ttgccccttaagtggatggctccagagagcatcttcaacaacctttacaccaccctgagt
gacgtgtggtcttttgggattcttctttgggagatattcactctaggagggactccatac
cctgagctgcctatgaatgaacagttctacaacgccatcaaacgtggctatcggatgtcc
aaacccacccatgcctctgatgaaatctacaacatcatgcagaagtgctgggaggagaag
tttgagatcaggccatccttctcacagctggtggtgcttatgggaaacctcctggtggac
tgctacagaaagaggtaccagcaggtggatgaggagttcatgaagagtgaccaccccgct
gttgtgcgcaccagacccgcagttcctgtgctgaacaacgcccgccttgctgccagctcc
cccagcagcagcaccctctacacagccgtgcaccagagcggggctgacaatgactatatc
atccctctgcccgaccccaaacccgaggcaagctgtgacctcccccaggaggcctccatc
agccgggccagctctatgctgaacgaggccaacacatcatctacaatatcctgtgacagc
cctctgggcctccggccggacgaggagcaggaatccgacccacagccaggctgccaggag
ccaagcacaggacaccaagaggtggaggagagcttcctgtag
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