Ficedula albicollis (collared flycatcher): 101810022
Help
Entry
101810022 CDS
T02815
Symbol
OTOF
Name
(RefSeq) otoferlin
KO
K19949
otoferlin
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fab04131
]
101810022 (OTOF)
Membrane trafficking [BR:
fab04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
101810022 (OTOF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FerB
Ferlin_C
dsrm_Ferlin
FerI
Motif
Other DBs
NCBI-GeneID:
101810022
NCBI-ProteinID:
XP_016160866
LinkDB
All DBs
Position
Un
Genome browser
AA seq
2100 aa
AA seq
DB search
MALVLQLRSVSGLRGRGDRIAKAAFRGLSFYTRVLENCEDEAKFEETFRWPVATNIDGNE
ILEIQVFNYSKVFTNRLIGTFRMVLQKVVAEGQLEVTDTLIDDNNSAIQTSISIEIRYQA
LDGTVGSAWNDKEFLETPSVHSEGDGRYSLETDSLLSGHRHGSDASPGKSNQQSADRSFR
RMEEDELYFHSEDELLGEGDSLSQGSLDTSLGDEAEEDQHSRIKFNDGYKAVASEDPEDP
RAKAKGKEKKHLVLPFSKGKEKTKEHKAGKGVFSAMKLGKTRPSKDEHRKQDDPAVLETE
DLDRKAMRYGAGLEPDTISLASVTAVTTNVSNKRSKPDIRMEPSAGRPMDYQVSITIIEA
RQLVGLNMDPVVCVEVGEEKKYTSMKESTNCPYYNEYFVFDFHVPPDVMFDKIIKLSVIH
SKNLLRSGTLVGSFKMDVGTVYTQPEHQFYHKWAILSDPEDLTASLKGYLKCDIAVVGKG
DNIKTPHKANETDEDDIEGNLLLPDGVPPERQWARFYIKIYRAEGLPRMNTSIMANVKKA
LIGENKDLVDPYVQVAFAGQKGKTSIQKSSYEPLWNEQIIFTEMFPPLCRRIKIQIRDSD
KVNDVAIGTHFIDLRKVSNEGDKGFLPTFGPAWVNMYGSTRNYTLMDEHQELNEGLGEGV
SFRARLLLGLAVEILDTTNPEINSSTEVQVEQATAVADNCSGKMEEFFLFGAFLEATMID
RKIGDKPINFEVTIGNYGNQVDGSSKPLLRRKKEGGDGDEEESELLQNSSDDEGGEDGEL
VSVSSSQPMKPLVTDRNYFHLPYLEKKPCIYIRSWWQDQRRRLYNANIMDKIADKLEEGL
NDVQEMIKTEKPHPERRLRGVLEELSSGCLRFLTLADKDQHHSSRTRLDRERLKSCMREL
ENMAQQATALRSQVKRNTMKDKLKLVQNFLQKLRFLADEPQHTIPDVFIWMMSNNKRIAY
ARIPSKDILYSIVDEEMGKDCAKVKTVFLKHPGKRGFGPAGWTVQAKMEIYLWLGLNKQR
KDFLSGLPCGFEEKKVPRGQNLPSFPPISLLYTKKQVFQLRAHMYQARSLFAADSSGLSD
PFARVFFISQSQCTEVLNETLCPTWDQLLVFDNVELYGEAHEMRDDPPIIVIEIYDQDTV
GKADFMGRTFAKPVVKMSDEQYCPPRFPPQLEYYQIYRGNATAGDLLAAFELLQIGPGGK
SDLPPIDGPTDMDRGPILPVPLGIRPVLSRYRVEILFWGLRDLKRVNLAQVDRPRVDIEC
AGKGVQSALIQNYKKNPNFSTLVKWFEVDLPENELLHPPLNIRVVDCRAFGRYTLVGSHT
VSSLRKFIYRPPDKKAQQWNMAAKHLNGCLAMTSRAHRSRPTGEIVVNMEPEVPIKKMDT
MVKLEANSDAVVKVDVTEEEKEKKKKKKKGGGGGGGGGEEVEEEEPDESMLDWWSKYFAS
IETMKEQLRQQEAAAAEAEEKEEMEIGEGSKAQAKNKDKDKSKAPKDDKKKKQQPGPELP
EKKSKQKIDELKVYNKELEAEFDNFEDWLHTFNLLRGKIGDNDDNATEEERIVGRFKGSM
CVYKVPLPDDIAKEAGYDPTFGMFQGIPSNDPINVLVRVYIVRATDLHPADINGKADPYI
AIKLGKTDIKDKENYISKQLNPVFGKSFDIEATFPMESMLTVAIYDWDLVGTDDLIGETK
IDLENRFYSKHRATCGVSQTYSIHGYNTWRDPMKPSQILSKLCKEGKVDGPHFGPGGRVK
VANRVFTGPTEIEDENGQKKPTDEHLALAVLRHWEDIPRAGCHLVPEHVETRPLLNPDKP
GIEQGRLEMWVDMFPMDMPAPGPAIDISPRKPKKYELRVIVWNTDEVILEDDDYFTGEKS
SDIFVRGWLKGQQEDKQDTDVHYHSLTGEGNFNWRYIFPFDYLMAEEKIVISKKESMFSW
DETEYKIPARLTLQVWDADHFSADDFLGAIELDLNRFPRGAKTSKQCSLEMVTNEAELPM
ISIFKQKRVKGWWPFVARDENDELEITGKVEAELHLLTAEEAEKSPAGLARNEPDPLEKP
NRPDTSFIWFLNPLKSIKYLICTRYKWLIIKIVLALLLLIMVALFLYSMPGYMVKKLLGA
NT seq
6303 nt
NT seq
+upstream
nt +downstream
nt
atggctctggtgctgcagctccgctccgtctccggcctccgcggcagaggcgaccgcatc
gccaaggcggcgttccggggactttccttctacacgcgagtgctggaaaactgcgaggac
gaggccaagtttgaggagactttccgctggccggtggcgaccaacatcgatgggaatgag
atcctggagatccaagtgttcaactacagcaaagtcttcaccaacaggctcatcgggacg
ttccgcatggtgctgcagaaggtggtggcggaagggcagctggaggtgacggacacgctc
atcgacgacaacaactcggccattcagaccagcatctccatcgagatccgctaccaggcc
ctggatgggacggtgggcagcgcctggaatgacaaggagttcctggagacgcccagcgtg
cactcggagggggatgggaggtattccttggagaccgacagcctcctgtccggccaccgg
cacggctccgacgcctctcccgggaaatccaaccagcaatccgcggacaggagcttccgg
aggatggaagaggacgagctgtatttccacagcgaggatgagctcctgggagagggggat
tccctgagccagggatccctggacacgagccttggagacgaagcagaagaagatcagcat
tccaggattaagtttaacgatggatacaaggcagtggcaagtgaagacccggaagatccc
agagccaaggccaaagggaaagagaaaaaacacctggtgttgccgttcagcaaaggcaag
gagaagaccaaggagcacaaggctggaaaaggagttttctcagccatgaagcttggaaag
acgcgcccgtccaaggatgagcaccggaaacaagacgatccggctgttctggaaacagaa
gacctggacagaaaggccatgagatacggagcaggcctggagccagacaccatctccctg
gcctctgtcaccgctgtcaccaccaatgtctccaacaaaaggtccaagcctgacatcagg
atggagccgagtgccgggaggcccatggactaccaggtcagcatcaccatcatcgaggcc
cggcagctcgtggggctcaacatggaccccgtggtgtgcgtggaggtgggggaggagaag
aaatacacctccatgaaggaatccaccaactgtccttactacaacgagtatttcgttttc
gatttccacgttccccccgatgtcatgttcgacaagatcatcaagctctccgtgatccac
tccaaaaacctcctgcggagcgggacgttggttggatccttcaagatggatgttgggact
gtttatacccagcctgagcaccagttctaccacaaatgggccatcctgtccgaccctgag
gacctcacggccagcctcaagggctacctcaagtgtgacatcgccgtggtgggcaaaggg
gacaacatcaagaccccgcacaaggccaacgagacggacgaggacgacattgaagggaac
ctcctgctcccggacggggtccccccggagcggcagtgggctcggttctacatcaagatc
taccgcgccgaggggctgccgcggatgaacaccagcatcatggccaacgtcaagaaggcg
ctcatcggggagaacaaggacctggtggacccctacgtgcaggtggccttcgcggggcag
aagggaaagacatccatacagaagagctcctacgagcccctatggaacgagcaaatcatc
ttcacagagatgtttcccccgctgtgcagacggatcaagatccagatccgggactcggac
aaggtcaacgacgtggccatcgggacccacttcatcgatctgaggaaagtctccaatgaa
ggggacaaaggtttcctgcccaccttcggccccgcctgggtgaacatgtacggctccacc
cggaactacacgctgatggacgagcaccaggagctcaacgagggcctgggcgagggcgtc
tccttccgcgcccggctcctgctggggctggccgtggagatcctggacaccaccaacccc
gagatcaacagctccaccgaggtgcaggtggagcaggccacggccgtggccgataactgc
agcgggaagatggaggaattcttcctcttcggagccttcctggaggccaccatgatcgac
aggaagattggggacaaacccattaactttgaggtcaccataggtaactatggcaaccag
gtggatggctccagcaaacccctcctgaggaggaagaaggagggaggggatggggacgag
gaggagtcggagctgctccagaattccagtgatgatgaaggtggtgaggatggagagctg
gtctctgtttcttcgtcccagcccatgaagcccctggtcacggacaggaattacttccac
ctgccctacctggagaagaagccctgcatctacatccggagctggtggcaggaccagcgg
cgccggctctacaacgccaacatcatggacaagatcgccgacaagctggaggaggggctc
aatgacgtgcaggagatgatcaagacggagaagccgcacccggagcggcggctccgaggg
gtcctggaggagctgagcagcggctgcctgcgcttcctgaccttggctgacaaggaccag
caccactcgtcccgcacgaggctggaccgggagaggctcaaatcctgcatgcgggagctg
gagaacatggcccagcaggccacggccctgcgctcccaggtcaagaggaacaccatgaag
gacaagctgaagctggtgcagaacttcctgcagaagctgcggttcctggcggacgagccc
cagcacacgattcccgacgttttcatctggatgatgagcaacaacaagcgcatcgcctac
gcccgcatcccttccaaggacatcctgtactccatcgtggacgaggagatgggcaaggac
tgcgccaaagtgaagacagttttcctcaagcaccccgggaagagggggttcggccctgct
ggctggacagtccaggccaagatggagatctacctgtggctgggcctcaacaagcagcgc
aaggacttcctgagtggcctcccctgtgggttcgaggagaagaaagtcccccgaggccaa
aacctgccctccttcccacccatcagcctcctgtacaccaagaaacaggtgttccagctg
cgagcccacatgtaccaagccaggagtttgttcgcagccgacagcagtggcctctcggat
cccttcgcacgggtcttcttcatctctcagagccagtgcaccgaggttctcaacgagacc
ctttgcccaacctgggaccagctcctggtgtttgacaacgtggagctgtacggggaagct
cacgagatgcgggatgacccccccatcattgtcatcgaaatctacgaccaggacaccgtg
ggaaaagccgacttcatgggccggacatttgccaagcctgtggtgaagatgtcggacgag
cagtactgccccccgcgcttcccaccacagctggaatattaccagatctaccgcggcaac
gccacagccggggacctgctggccgccttcgagctgctccagatcggccctgggggtaaa
tcagacctgcccccaatcgatggccccacggacatggaccgaggtcccatcctgccggtg
cccctgggaattcggccggtgctgagcagatacagagtggagatcttgttctgggggctc
agggacctgaagagagtgaacctggcccaggtggaccggccccgcgtggacatcgagtgt
gccgggaagggcgtccagtctgccctgatccagaactacaagaaaaaccccaacttcagc
actttggtcaagtggtttgaggtggacctcccagagaacgagctgctgcaccctcccctg
aatattcgggtggtggactgccgagccttcggccgctacaccctggtgggctcccacacc
gtcagctccctgcgcaaattcatctaccgcccgcccgacaagaaagcccagcaatggaac
atggcagccaaacacctcaacggctgcctggccatgaccagcagggcccatcgctctcgc
cccacaggggagatcgttgtcaacatggagcccgaggttcccatcaagaagatggacacc
atggtgaagctggaagctaattccgatgctgtggtgaaggtggatgtgaccgaggaagag
aaggagaaaaagaagaagaagaagaaaggaggaggaggaggaggaggaggtggggaggaa
gtggaggaagaggagcccgacgagagcatgttggactggtggtccaagtacttcgcctcc
attgagaccatgaaggagcaactccggcagcaggaagcagccgcggcagaggcggaggag
aaggaagagatggagatcggagagggctccaaggctcaggcaaagaacaaggacaaggac
aagtccaaggcacctaaagatgacaagaaaaagaagcagcagcctggccctgagctccct
gagaagaagagcaagcagaagatcgatgaactcaaggtctacaacaaagagctggaagca
gagtttgacaactttgaggactggctgcacaccttcaacctgctccgggggaagattggg
gacaacgacgacaacgccacggaggaggagcggatagtggggaggttcaagggctccatg
tgcgtctacaaagtgccgctccccgatgacatcgccaaggaggcgggatatgaccccacc
ttcgggatgttccagggcatccccagcaacgaccccatcaatgtgctggtccgagtctac
atcgtgagggccacggacctccacccagctgacatcaatgggaaagccgacccctacatc
gccatcaagctgggcaagacagacatcaaggacaaggagaactacatctccaagcagctg
aaccccgtctttgggaaatccttcgacatcgaggccaccttccccatggagtccatgctg
accgtggctatttacgactgggacttggtgggcaccgacgacctcatcggggagaccaag
atcgacctggagaatcgcttctacagcaagcaccgggcgacctgcggggtgtcccagacc
tactccatccacgggtacaacacctggcgtgaccccatgaagccttcccaaatcctgtcc
aagctgtgcaaagagggaaaagtggatgggccacactttgggccggggggaagagtgaaa
gttgccaacagagtcttcaccggccccacggagatcgaggatgaaaatggccagaagaag
ccgacggacgagcacctggcgctggcggtgctgcggcactgggaggacatcccgcgggcc
ggctgccacctggtccccgagcacgtggagacgcggccgctgctcaaccccgacaagccg
ggcatcgagcagggccgcctggagatgtgggtggacatgttccccatggacatgccagcg
cctggtcctgccatcgatatttctcccaggaaaccaaagaagtacgagctcagggtgatc
gtgtggaacaccgacgaagtcatcctggaggacgacgactacttcaccggcgagaaatcc
agcgacatttttgtcagggggtggctgaaggggcagcaggaggacaaacaagacacggat
gtccattaccactccctcactggtgagggcaacttcaactggcgctacatcttccccttc
gactacctgatggctgaggagaagattgtcatctccaagaaggagtccatgttctcctgg
gacgagacagagtacaagatcccggcccgcctcaccctgcaggtctgggatgccgaccac
ttctcagccgatgatttcctgggggccatcgagctggacctgaaccgcttcccccgggga
gccaagacgtccaagcagtgcagcctggagatggtgaccaacgaggctgagctgcccatg
atctccatcttcaagcagaagcgggtcaagggctggtggccgttcgtggccagagacgag
aacgatgagctggagatcaccggcaaagtcgaggccgagctgcaccttctgacagcagag
gaggctgagaaatcccctgctgggctggctcgaaatgagcctgatcccctggagaaaccc
aaccgcccggacacgtcgttcatctggttcctgaacccgctcaagtccatcaaatacctc
atctgcacccgctacaagtggctcatcatcaagatcgtgctggccctgctgctcctcatc
atggtggccctgttcctctacagcatgccgggctacatggtcaagaaactgctgggagca
tga
DBGET
integrated database retrieval system
