Ficedula albicollis (collared flycatcher): 101810423
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Entry
101810423 CDS
T02815
Symbol
LGI1
Name
(RefSeq) leucine rich glioma inactivated 1
KO
K25428
leucine-rich repeat LGI family member 1
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
101810423 (LGI1)
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Gene cluster
GFIT
Motif
Pfam:
EPTP
LRR_8
LRR_4
LRR_5
LRR_9
LRR_14
DUF7448
LRRCT
VWC2L_1st
Motif
Other DBs
NCBI-GeneID:
101810423
NCBI-ProteinID:
XP_005048460
UniProt:
U3JZF5
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Position
6:complement(20327503..20358146)
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AA seq
544 aa
AA seq
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MGNASRPFRRIAYFLCLLSVLLLTEGKKPVKPKCPAWCTCTKDNALCENARSIPRSVPPD
VISLSFVRSAFTKIPEGSFLLTPSLQLLLFTSNTFDVISDDAFMGLPHLEYLFIENNNIK
SISRNTFRGLKSLIHLSLANNNLQSLPKDIFKGLDSLTNVDLRGNAFNCDCKLKWLVEWL
GTTNATVEDIYCESPPEYKKRKINSLSSKEFDCIITEFEVYQSLPYQSLSVDTFSYMNDE
HVVIAQPFTGKCIFLEWDHVEVMFRNYDNITGTSTVVCKPIVIESQLYVIVAQLFGGSHI
YKRDIFANKFIKIQDIEILKIRKPNDIETFRIAEDWYFVVADSSKAGFTTVYKWNGNGFY
SHQSLHAWYRDTDVEYLEISGKPHLILSSSSQRPVIYQWNKGTNEFVKRFDIQDMEDAYA
VKHFKVKEDVYICLTRFIGDSKVMKWGGSAFLDLQRMPSRGSMVFQPLQINNYQYAILGS
DYSFTQVYYWDAEKAKFVKFQELNVQAPRSFIHVSIDKQRDFLFASSFKGTTLIYKHEIV
DLSA
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatgccagcagaccctttagaagaattgcttatttcttatgccttttatctgtg
cttttgctgactgaagggaagaaaccagtgaagccaaaatgtcctgcctggtgtacttgt
accaaagataatgctttatgtgaaaatgccagatctattcctcgcagcgttccgcctgat
gttatctcactatcctttgtgagatctgcttttactaaaatcccagaagggagttttttg
ctcacaccatctctgcagcttctgttgtttacgtccaacacttttgatgttattagtgat
gatgctttcatgggccttcctcatctagaatatttgttcatagagaacaacaacattaag
tcaatttcaagaaatacattcagaggactgaaatctttaattcacctgagtctcgcaaat
aataatctccagtcacttccaaaagacatatttaaaggcttggattctttaacaaatgta
gatcttagaggcaatgcatttaattgtgactgcaaactgaagtggttagtggagtggctg
ggcaccaccaatgcaactgttgaagacatttactgtgaaagcccaccagaatataagaag
cgcaaaatcaatagcctctcttcaaaagagtttgattgcattattacagaatttgaggtt
tatcagtccctgccataccaatctctgtcagtagatactttctcatatatgaatgatgaa
cacgtggttattgctcagccttttactggaaaatgcatctttcttgaatgggaccatgtg
gaagtgatgttcaggaattatgacaacattacaggtacttcaactgttgtgtgtaaacct
atagttattgagagtcagctgtatgtcattgtcgcacagttgtttggaggctcccacata
tataaaagagatatttttgctaataagtttataaaaattcaagatattgaaatccttaaa
atccgaaaacccaatgacattgaaactttcaggattgctgaagactggtattttgttgtt
gcagacagttcaaaagctggtttcaccacggtttacaagtggaatgggaatggattttat
tcccatcagtctctgcacgcctggtacagagatactgatgtggagtatctcgaaatatct
ggcaaaccacatttaattctgtcaagtagttcgcaaagacctgtaatatatcaatggaac
aaaggaacaaatgaatttgttaagcggtttgatattcaagatatggaagatgcatatgca
gtgaagcatttcaaagtgaaagaggatgtatacatttgcttaacaagatttattggggac
tctaaagtaatgaagtggggtggttcagcatttctggatttacaaaggatgccatcccga
gggtcaatggtattccaaccacttcagataaataattatcaatatgccattcttggaagt
gattattctttcactcaagtctattattgggatgcagaaaaggcaaaatttgtgaagttt
caagaattaaacgtacaggcaccaagatctttcatacatgtctccatcgataaacaaaga
gattttctctttgcttcaagttttaagggaactacattgatttataaacatgagatagtt
gacttaagcgcatga
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