Ficedula albicollis (collared flycatcher): 101811036
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Entry
101811036 CDS
T02815
Symbol
CD4
Name
(RefSeq) CD4 molecule
KO
K06454
T-cell surface glycoprotein CD4
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab03250
Viral life cycle - HIV-1
fab03260
Virion - Human immunodeficiency virus
fab04060
Cytokine-cytokine receptor interaction
fab04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
101811036 (CD4)
03260 Virion - Human immunodeficiency virus
101811036 (CD4)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
101811036 (CD4)
04514 Cell adhesion molecule (CAM) interaction
101811036 (CD4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
fab04090
]
101811036 (CD4)
CD molecules [BR:
fab04090
]
Proteins
101811036 (CD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tcell_CD4_C
V-set
ig
Ig_3
Ig_2
C2-set
I-set
CD4-extracel
Sema4F_C
Egh16-like
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
101811036
NCBI-ProteinID:
XP_005038489
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All DBs
Position
1:complement(92446859..92453441)
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AA seq
487 aa
AA seq
DB search
MESCGKAVSHTSATFLLLHLGLISSMAHQNELQTGLAGGEVTLNCTGILPDSKLSRDTLV
HWKYYDTPLWRMEKGRPWRTSAFITDRFAIKTQYKQLWVRNLKLSDAGIYTCEYGSHKVR
TSLHIFKLMIPLDGHFLQNEVPELILMQNSSSPLPDLRITLLDSHNNRVTPELQNKSRQK
YIVNLRKLETMDSGTWVCQVHSDSPLIDQNIPFAVKVLGFQNPDLERKYATVDSTVILSW
HLNSQKIKWKEGFTGQLNWKQQESANPHELLDFNITAQGQLHETKKSSDFLFEIPEIKPE
STIEVKLPKVHFNHSGQYQCQLEYQGRHAQSKIELVVMKVSAKPVGPLSRGANMTLTCQV
AGPLPPNAYLRWERVNGTKMDIKNSKQKEVKLEVNISAAGLWSCHLIEDSDRKISAHYHV
EEAAAWTNYVIIGASVGGSLLVFAIGCLCIITVTNWQRRRQRAKRMAQARQYLLENKTCQ
CQHRLKK
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggaatcgtgcggcaaagccgtgagccacacgtctgccaccttcttgcttctgcatctg
ggtctgatctccagtatggctcaccaaaatgaattgcagactgggcttgcaggaggggag
gtgaccctgaactgcacaggcatacttcctgactcaaaattatcccgggacacacttgtg
cactggaagtactatgatactcctttatggcgtatggaaaagggtagaccttggagaaca
tcagctttcattactgatcgatttgccatcaagacgcaatataaacagctgtgggtgcgg
aatttgaagctctccgacgctggcatctacacctgtgaatatggctcccacaaagtccgc
acctcactgcatatctttaaattgatgatccctttggatgggcattttctgcaaaatgaa
gtccctgagctgattttaatgcaaaattcatccagtcctctaccggatctaagaatcaca
ttgcttgacagtcacaataacagagtaacaccagaattacaaaacaagagccgtcaaaaa
tacatagtgaatttaaggaaactggagactatggacagtgggacctgggtgtgtcaggtc
cattcagactctccattgattgatcagaacatcccctttgctgtgaaggtattaggtttt
cagaatccagatttggaaagaaagtatgcaactgttgatagcactgtcatcttgtcatgg
catctgaactcccagaagataaaatggaaagaaggtttcacaggacagctgaattggaaa
caacaggaaagtgcaaaccctcatgagctgcttgatttcaacatcacagcacaaggacag
ctgcatgagaccaaaaaaagcagcgactttctgtttgagatacctgaaataaaacctgaa
agtaccatagaagtgaagctccccaaagtgcatttcaaccattctggccagtaccagtgc
cagctggagtaccaaggaagacatgcacagagcaagatagagctggtggtgatgaaagtc
tcagctaagcctgttgggccactctccagaggggccaatatgaccctgacctgccaggtc
gctgggccgctcccacccaatgcctacttgcgctgggaacgtgtgaatgggactaagatg
gacattaagaactcaaagcagaaagaagtaaagttggaggtgaacatcagtgctgcgggg
ctgtggagctgtcacctcatagaagacagtgacagaaagatcagcgctcattaccacgtg
gaggaagctgctgcttggactaactatgtgataattggagcaagtgttggaggcagttta
ttggtgtttgcaattgggtgcctgtgcatcatcactgttacaaactggcagcggagaagg
caacgggcaaaaaggatggcacaagcaagacaatacttgctggaaaacaagacgtgtcag
tgtcaacaccgactgaagaagtaa
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