Ficedula albicollis (collared flycatcher): 101812472
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Entry
101812472 CDS
T02815
Symbol
TTC3
Name
(RefSeq) tetratricopeptide repeat domain 3
KO
K15712
E3 ubiquitin-protein ligase TTC3 [EC:
2.3.2.27
]
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fab04121
]
101812472 (TTC3)
Enzymes [BR:
fab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101812472 (TTC3)
Ubiquitin system [BR:
fab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101812472 (TTC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTC3
TTC3_DZIP3_dom
WHD_TTC3
TTC3_9th
zf-RING_2
TPR_1
zf-rbx1
TPR_BSK1_C
zf-C3HC4_2
TPR_2
TPR_17
zf-C3HC4
TPR_11
zf-RING_UBOX
CARD
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
101812472
NCBI-ProteinID:
XP_016153591
LinkDB
All DBs
Position
1:2910529..2966537
Genome browser
AA seq
1954 aa
AA seq
DB search
MADSLTVSLYEALAVFGDDPCYLQLGRGTFGQPVPNPKTGVDPCEVWCSLPVEKLREYCN
VIKIRMFWSLLFSRESIAFMGEYNWLLLCWDMKIIDDCTVLEKAADLIKKVVNIPHFISG
ILRIGSGIENGCFHLAEAVEWVKCVGGTNILQSLEQLDCSRVKLGILFIEWKTFITKVAL
EGCDLVAEFEAQTCEISRKKSELLKQNGNAAFSQGALGSAIVSYTKAIEFCPTNHLLYGN
RALCYIHTRQYMKAVIDGKRAIILKPDWPKGHHHYCKALALLGRTEMALEASERAQELCQ
ENPQGLKELIQQSEKFKKTLQEAHGAKLEQKAKKPLLEKKGCTSSKSPSRICQEQKEVEK
GKKRTQAEPKHPQGPPKQDAKVAEPQRSEGKVSTLEEPPNQSQQNKQKPKTKTCDYEKMR
DHVDLKRESKAMEDKGFCAVPQGDFSADVKSLGQEDGAPLVDSPKPLILPLLRALNAPEF
AVDFSSLPDEVKALARDGCRSLLEQQCHGAERAFAQLLAILYSSGFSYVNILNINYVIFL
YGHATALLGIGHPEALAKAEHQFRKIMEEYPEESCFCLAHYGIGKVYLRQNRFVHALDQF
VRAKLMIDFKIVPGVLMWPGTTQVIEETRIENLQMALRNCIEECKFPPEPDAVCRYQQCH
GYSKIQIYFTDPDFKGFIRVICCQQCRVEFHISCWKKLKTTSYSDKNDKDFLKEMCFTPD
CKGLISKIVIFSSSGLVKCEFEQKIPKPKEPPRACIKQKCSSLRKIKMKQEKKVRRKRAR
EEARNSARKKAEEKQEGNEESQYSQHRGYGQDLYAGDQVLQHIRRNSQQIKAAVPDAAKL
LKELLAWGVIREEDFTSYSQMNGTSQEVLEQLISSLLQEKCRVQSRGFLHVLSQLGEVDP
KVHKWLQHLNNLGLTATKNFLLQYGQVLQELDLSILTPLWNQKYGNKFDYVAADGEKQEI
CDYFLTPPLEKSRCFIWLLEENREHFPGLHQALDEFFDKMDDPTIILKKQGNENLSNNEI
KVKNKNRKKNLKDSKSILVLSSGVSTAPREEEKIFIEENNLYRDFPNEPFVIPEYLREQL
EEFEALYNDSNSNNYPMNNNNNNNPDPICENLYDYFSQILDEHGPLEINNKLLVGEYENF
PEETRKVVEDEGGLEPFLLKSLRFIMVDNLIALRKHLVLFEGNPSRNEAGNKKGNDKSGD
SSHSKLPLNPYAQEFTPQSYPLSAPPDLSDYPTPPYLPCSFPASCPPGNNPLENEDSMEN
SMEAPFPGVLLNTFQPAGPALFLPQSSWGYQYGILPLAQPAFICADPAAHQDHQKSAIPR
GNCGPEGFVPGESQGGLMGNRDEQDPALPSASDGAEGAKKGKERRKKAGMKSNPHTRMVA
VQVNKEVADRETNTLPFHPFESQQGDILRMEKEHQVLKEQLREAEEKFEQLQSRSLEETG
ALEELLKKSIEETEVSQNELDWFHQDSEAQMKKWQQEKKENRENLKALRGTVKKHSDTNE
RYLKAIDDKEKQYNACLSTFLETSNKFANEKGKLEELIKKSQDDSQECEKRAVKAEVSVL
QTWKETEVWKLKGTIAKAEGNLRMLKALSSSSASAAPVLKPQIDSWEIFVSNVKKQLEKV
EAEYEEKMELVKKGARDCLSKVEIVDFPYPQALVTIPGRSPMCDPAIVTYSSASAHPSAL
PAFSSSDGKAPAQPPLQAQAGAKPAPATSEASSAAGKTHPKAPQGSHSNKFSPSCPSGIS
GSNSQQVQPNQTYQDPSALQPSGILNNKKLPKKIAKIFAQLQTIFPNYSSSELLGSIRDV
QRRNGSAAAELSPDEILSRVTELILEQQHRSAPPARSRQGPVEGTAPGSPRAAPAPPTSS
SKNPSQPNLQPWGNAGAAPKAKWRKQDDGASSEDPCSICHDELSKDCCELECGHHFHREC
IRTWLKQHSTCPICRVHALLPEDFPELPAWNKYS
NT seq
5865 nt
NT seq
+upstream
nt +downstream
nt
atggctgattctctgacggtgtccctctatgaagccttggctgttttcggagatgatcca
tgctacttacagctgggtcgtggaacctttggacagccagtgcctaatcctaaaacagga
gttgatccctgtgaggtgtggtgcagtctacctgtggaaaaattaagggaatattgcaac
gtgatcaaaatcaggatgttctggtctttgctcttcagcagggaaagcattgcctttatg
ggtgaatataattggctcctcctgtgctgggacatgaagataatcgatgattgcactgtg
ttggaaaaagctgctgatttaattaaaaaagttgttaacatcccacacttcatcagtggc
atcctgaggattggcagtggaatagaaaatggatgcttccaccttgcagaggctgtggaa
tgggtcaagtgtgtgggtggtaccaacatcctgcagagcctggagcagctggactgcagc
cgggtcaaacttggaattctgttcattgagtggaaaactttcatcaccaaagtggcactg
gaaggttgtgatttagtggcagaatttgaagctcagacctgtgagatctccaggaagaaa
agtgaattactgaagcagaacggaaatgctgcgttttcccaaggagccctgggctctgcc
atcgtgtcatacaccaaagccatcgagttttgccctacaaaccacctgctgtatggaaac
cgagctctgtgttacattcacactaggcagtacatgaaagctgtaattgatggaaaaaga
gccataattctcaagcctgattggccaaagggtcaccaccactactgcaaagccctggct
ctgctgggcaggactgagatggccctggaggccagtgagagagcccaggagctgtgccag
gaaaacccccaggggctcaaggagctcatccagcagagtgagaaattcaagaagaccctg
caagaagcccatggtgctaaacttgaacagaaggcaaagaagcctctgcttgagaaaaaa
ggctgcacttcttcaaaatctccttcaagaatctgccaagaacagaaagaagtagaaaaa
ggcaagaagagaacccaggctgagcccaaacatccccaggggcctccaaaacaggatgcc
aaggtggctgagccccagagatcagaaggcaaagtttccacgctggaggagcctccaaac
caaagtcagcaaaacaaacaaaagcccaaaaccaaaacttgtgactatgaaaagatgagg
gatcatgtggatttgaagagggaatctaaagccatggaggataaaggtttctgtgctgtg
ccacagggggatttcagtgcagatgtaaaatccctggggcaggaggatggtgcacccttg
gtggacagtcctaaacctttgatattacccctgctgagagccttgaatgctccggaattc
gcggtggatttcagctccctgcccgacgaggtgaaggccctggctcgggatggctgcagg
tccctgctggagcagcagtgccacggggccgagcgagcctttgcccagctcctggccatc
ctctacagctcaggattttcgtatgtgaatattcttaatattaattatgttatattcctc
tatggacatgccactgccctcctgggaataggacatcctgaggcattggcaaaggctgaa
catcaatttaggaaaataatggaggaatatccagaagagagttgtttttgtttggcacac
tatggaattggaaaggtttacctcaggcaaaacaggtttgttcatgccctcgaccagttt
gtgagagcaaagctgatgattgatttcaagattgtccctggggttttaatgtggccagga
acaacccaagtcatcgaggagacacgaatagagaatttacagatggctttaaggaattgt
attgaggaatgtaaattccctccagagccagatgctgtttgtcgatatcagcagtgccat
ggctactccaaaatccaaatatattttacagacccagactttaagggttttatacgtgtt
atttgctgtcagcagtgcagagtggagttccacatcagctgctggaaaaagctgaaaaca
acaagctacagtgataaaaatgataaggatttccttaaggaaatgtgttttactcctgat
tgtaaaggccttatttcaaaaatagttattttcagttcttctgggctggtaaaatgtgaa
tttgaacaaaaaatcccaaaacccaaggagcctccaagggcctgtataaaacagaaatgt
tcaagtcttaggaagataaaaatgaaacaagaaaaaaaagtgcggcgaaaacgagcgcga
gaagaggctcggaattctgccaggaaaaaagctgaggaaaagcaggaggggaatgaagaa
tcccagtacagccagcacaggggttatggccaggatttatatgctggggaccaggtgctg
cagcacatccggaggaattcccagcagatcaaagctgctgtccctgacgctgccaaatta
ctgaaggaattactggcatggggtgtgatcagagaggaggatttcacctcttattcccag
atgaatggcacttcccaggaggtgctggagcagctcatcagctccttactccaggagaaa
tgcagagtgcagagcagggggttcctgcacgtgctgagccagctgggagaggtggatccc
aaagtgcacaagtggctgcagcacctaaataacctgggtctgacagctacaaaaaacttt
ctccttcaatatggccaagttctgcaagagcttgacctttctattttaaccccactgtgg
aaccagaaatatggcaataaatttgattatgtggcagctgatggtgaaaagcaagaaatt
tgtgattacttcctcacccctcccctagagaaatcccgttgttttatatggcttttagaa
gaaaacagagaacattttccaggcctccatcaagctttagatgaattctttgataaaatg
gatgacccaaccattatattaaagaagcagggaaatgagaatttatcaaataatgaaatc
aaagttaaaaacaaaaacaggaagaagaatttgaaagattcaaagtctattttagtatta
tccagtggagttagtacagcaccacgagaagaagagaagatatttatagaagaaaataat
ttgtacagagattttcccaatgaaccctttgtaatcccagaatatctccgggagcaactg
gaggaattcgaagctctctataatgattccaatagtaacaattatccaatgaataataat
aataataataatccagatccaatctgtgagaatttatatgattatttctctcaaatcttg
gacgaacatggccctctggaaattaataataaattattggttggggaatatgaaaatttc
cctgaggagacacggaaggtggtggaggatgaaggaggcctggagcccttcctgctgaaa
tccctccgtttcatcatggtggataacctgattgcattaaggaagcacttggtccttttt
gaaggaaatccaagcagaaacgaggctgggaataaaaaaggaaatgataaatctggggat
tcgtcccacagcaagctgccactgaatccctacgcccaggagttcacgcctcagtcgtac
cctttgtcagctcctcctgatttatcagattatccaactcctccatatttgccctgctcc
ttccctgcctcctgcccacctgggaataatcctctggaaaatgaagattccatggagaat
tccatggaggctccgttccctggggttttactgaacaccttccagcctgcaggcccggct
ctgtttttgcctcagagctcctggggttatcaatatggaatcttgcccctggcacagcct
gcttttatttgtgctgatcctgcagctcatcaggatcatcagaaatcagcaattccacgt
ggaaattgtggccctgaggggtttgtgcctggtgaaagccagggggggttgatggggaac
agggatgagcaggatcctgctttgccaagtgcttcagatggagctgagggtgctaaaaag
ggaaaagaaaggaggaaaaaagctgggatgaagagcaatcctcacaccaggatggtggct
gttcaggtaaataaggaagttgctgatagagaaaccaatactttgcctttccatccgttt
gaaagtcaacaaggagatattctccggatggaaaaggagcaccaggtactgaaagaacaa
ctcagagaagcagaggagaaatttgagcagttacaaagcaggagtttggaggaaactggt
gctttggaagagctcctgaaaaaaagtattgaagagactgaggtgtcccagaacgagctg
gattggttccaccaagactcagaagcacaaatgaagaaatggcagcaggagaagaaagaa
aatcgagagaacttgaaagctctgaggggcacagttaaaaaacactcagataccaatgag
aggtatttgaaggccattgatgacaaggaaaagcaatataatgcatgtttaagtacattt
ctggagaccagtaataaatttgctaatgagaaaggtaaattggaagagctgataaaaaag
agtcaagatgacagccaggagtgtgagaaaagagctgttaaagcagaggtctctgtgctc
cagacctggaaggaaactgaagtgtggaaactcaaaggcaccattgccaaggcagaagga
aatctcaggatgctgaaggcactgagcagcagctcagcttcagcagctcctgtgttgaag
ccccagattgattcctgggaaatatttgtttcaaatgtcaagaaacaactggaaaaagtc
gaggctgagtatgaagaaaaaatggagctggtgaagaagggtgcccgggactgcctcagt
aaagtggaaattgtggattttccttatcctcaggcacttgttacaatacctggcagatct
cccatgtgtgaccctgccattgtcacctattcctcagcatctgcacatcccagtgccctt
cctgcattttcgagttctgatggaaaagctccagcccagcctccactccaagcacaggct
ggagctaagccagcacctgccacctctgaggcttcttctgcagctgggaaaacacatccc
aaagctccacagggatcacattccaataaattctcaccatcctgcccatcagggatttct
ggaagtaactcccagcaggtccagcccaaccagacctaccaagatccctcagctctgcaa
ccttctggaattctaaacaacaaaaagcttccaaaaaaaattgcaaagatttttgcccag
ctccagactatattcccaaactacagcagctcagagctcctcggctccatcagggacgtg
cagaggagaaacgggagcgcggcggcggagctgagccccgatgaaatcctcagccgggtc
acggagctcatcctggagcagcagcaccgctccgctcccccggcgcggagccgccagggt
cccgtggaaggaacggcccccggctccccccgggcagcacccgcccctccaacctcctcc
agcaaaaacccctcccagccaaacctgcagccctggggcaatgctggagctgcacccaaa
gccaaatggagaaagcaggatgatggtgcctccagtgaggatccctgcagcatctgtcac
gatgagctgagcaaagactgctgtgagctcgagtgtggccatcacttccacagagagtgc
atccgaacgtggctcaagcagcattccacctgccccatctgccgtgtccacgctctgctt
cctgaggacttccctgagcttcctgcctggaacaagtacagctga
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