KEGG   Ficedula albicollis (collared flycatcher): 101813373
Entry
101813373         CDS       T02815                                 
Symbol
ACTB
Name
(RefSeq) actin beta
  KO
K05692  actin beta/gamma 1
Organism
fab  Ficedula albicollis (collared flycatcher)
Pathway
fab03082  ATP-dependent chromatin remodeling
fab04145  Phagosome
fab04210  Apoptosis
fab04510  Focal adhesion
fab04520  Adherens junction
fab04530  Tight junction
fab04810  Regulation of actin cytoskeleton
fab04814  Motor proteins
fab04820  Cytoskeleton in muscle cells
fab05100  Bacterial invasion of epithelial cells
fab05132  Salmonella infection
fab05164  Influenza A
Brite
KEGG Orthology (KO) [BR:fab00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    101813373 (ACTB)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    101813373 (ACTB)
  09143 Cell growth and death
   04210 Apoptosis
    101813373 (ACTB)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    101813373 (ACTB)
   04520 Adherens junction
    101813373 (ACTB)
   04530 Tight junction
    101813373 (ACTB)
  09142 Cell motility
   04814 Motor proteins
    101813373 (ACTB)
   04820 Cytoskeleton in muscle cells
    101813373 (ACTB)
   04810 Regulation of actin cytoskeleton
    101813373 (ACTB)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    101813373 (ACTB)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    101813373 (ACTB)
   05100 Bacterial invasion of epithelial cells
    101813373 (ACTB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:fab03021]
    101813373 (ACTB)
   03019 Messenger RNA biogenesis [BR:fab03019]
    101813373 (ACTB)
   03036 Chromosome and associated proteins [BR:fab03036]
    101813373 (ACTB)
   03029 Mitochondrial biogenesis [BR:fab03029]
    101813373 (ACTB)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:fab04812]
    101813373 (ACTB)
   04147 Exosome [BR:fab04147]
    101813373 (ACTB)
Transcription machinery [BR:fab03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     101813373 (ACTB)
Messenger RNA biogenesis [BR:fab03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     101813373 (ACTB)
Chromosome and associated proteins [BR:fab03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     101813373 (ACTB)
    NuA4 complex
     101813373 (ACTB)
  Chromatin remodeling factors
   BAF complex
    101813373 (ACTB)
   PBAF complex
    101813373 (ACTB)
   GBAF(ncBAF) complex
    101813373 (ACTB)
   SWR1 complex
    101813373 (ACTB)
Mitochondrial biogenesis [BR:fab03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Actin cytoskeleton organization
    101813373 (ACTB)
Cytoskeleton proteins [BR:fab04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actins
    Actins
     101813373 (ACTB)
Exosome [BR:fab04147]
 Exosomal proteins
  Proteins found in most exosomes
   101813373 (ACTB)
SSDB
Motif
Pfam: Actin
Other DBs
NCBI-GeneID: 101813373
NCBI-ProteinID: XP_005054472
UniProt: U3KHC4
LinkDB
Position
14:10934198..10939145
AA seq 375 aa
MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY
ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF
NT seq 1128 nt   +upstreamnt  +downstreamnt
atggatgacgatattgccgcgctcgttgttgacaatggttccggtatgtgcaaggccggt
ttcgccggggatgatgccccccgtgctgtcttcccatccatcgtgggtcgccccagacat
cagggtgtgatggttggtatgggtcagaaagacagctatgttggtgatgaagcccagagc
aaaagaggtatcctgaccctgaagtaccccattgaacacggtattgtcaccaactgggat
gacatggagaagatctggcatcacactttctacaatgagctgagagtagcccctgaggag
caccctgtgctgctcacagaggctcccttgaaccccaaagccaacagagagaagatgaca
cagatcatgtttgagaccttcaacaccccagccatgtatgtagccatccaggctgtgctg
tccctgtatgcctctggtcgtaccactggtatcgtgatggactctggtgatggtgttacc
cacactgtgcccatctacgaaggctatgccctcccccatgccatcctccgtctggatctg
gctggccgtgacctgacggactacctcatgaagatcctgacagagagaggctacagcttc
accaccacggctgagagagaaattgtgcgtgacatcaaggagaagctgtgctatgtcgcc
ctggatttcgagcaggagatggccacagctgcctctagctcttccctggagaagagctat
gaactccctgatggccaggtcatcaccattggcaatgagagattcaggtgccctgaggcc
ctgttccagccatctttcctgggtatggagtcctgtggtatccatgaaactaccttcaac
tccatcatgaagtgtgatgtggatatccgtaaggacctgtatgccaacacagtgctgtct
ggtggtaccacaatgtaccctggcattgctgacaggatgcagaaggagatcacagccctg
gcacccagcacaatgaaaatcaagatcattgccccacctgagcgcaaatactctgtctgg
atcggaggctccatcctggcctccctgtccaccttccagcagatgtggatcagcaagcag
gagtacgatgaatccggaccctccattgtccaccgcaaatgcttctaa

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