Ficedula albicollis (collared flycatcher): 101814910
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Entry
101814910 CDS
T02815
Symbol
EFTUD2
Name
(RefSeq) elongation factor Tu GTP binding domain containing 2
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101814910 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fab03041
]
101814910 (EFTUD2)
Spliceosome [BR:
fab03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
101814910 (EFTUD2)
Complex C
U5 SnRNP specific factors
101814910 (EFTUD2)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Septin
FANCL_d3
Motif
Other DBs
NCBI-GeneID:
101814910
NCBI-ProteinID:
XP_005059651
UniProt:
U3JYM2
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All DBs
Position
27:1605808..1625727
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AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDDDDDELGRESKDLDELEDDDDDDDMGEHDEDHPGMEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFSLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTIVLPDTKGKSFLFNIIDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLVL
SPLLGNVCFSSSQYSICFTLGSFAKIYADTYGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFILEPLYKILAQVVGDVDTTLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKVGAKTKIEHTYTGGIDSDLGEAMSECDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATVTEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKSLLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggacaccgacttgtacgacgagtttgggaactacatcgggcccgagttggactcggac
gatgacgacgacgagctgggccgagagtccaaagacttggacgagctggaggatgatgac
gatgatgatgacatgggggagcacgatgaggatcaccctgggatggaggtggtgctgcac
gaggacaagaagtactaccccacggcagaggaggtctatgggcctgaggtggagaccatc
gtgcaggaggaggacacacagccactcactgagcccattattaaacctgtgaaaaccaag
aagttctccctgatggagcagacgctgccagtcactgtctacgagatggatttcctggca
gatctgatggacaactcggagctgatccggaatgtgactctgtgtgggcacctgcaccac
ggcaagacgtgttttgttgactgcctgatagagcagacgcacccggaaatccggaagcgc
tacgatcaggatctctgctacacagatatattgttcaccgagcaggagaggggggtgggg
atcaagagcaccccagtgacgattgttctccccgacaccaaagggaagtctttcctcttc
aacatcattgacactccaggtcatgtgaatttttctgacgaggtgacagccggccttcgc
atctcggatggcgtcgtgctcttcatcgacgcggccgagggggtgatgctgaacacagag
aggctgatcaagcacgcggtgcaggagaggctggcagtgactgtgtgcatcaacaagatc
gacagactcatcctggagctgaaactgccccctacagacgcttattacaaactcagacac
attgtagatgaagttaatggtctgatcagcatgtattccactgacgagaacctcgtgctg
tctccccttctggggaacgtgtgcttctccagctctcagtacagcatctgcttcacactg
gggtcttttgcaaagatttatgcagacacatatggagacatcaattaccaggagtttgcg
aagcggctttggggcgacatctacttcaatccgaagacccgcaagttcaccaaaaaggcc
ccgacgagcagctcccagcgcagcttcgtggagttcattctggagcccctgtacaagatc
ttggctcaggtggtgggggatgtggacacgaccctgcccaggactctggatgaacttggc
atccacctgaccaaagaggaattgaaactgaacatccggcccctcctgcggctcgtctgc
aagaagttctttggggagttcacaggctttgtggacatgtgtgtgcagcacattccctcc
ccaaaagtgggggccaagacaaaaattgagcacacctacaccggcggcatcgactccgac
ctgggggaggccatgagcgagtgtgaccctgacggtcccttgatgtgtcacacaaccaag
atgtacagcactgatgatggtgtccagttccatgcctttggcagggtgctcagtggcacc
atccatgctgggcagcctgtgaaggtccttggggagaactacaccctggaggatgaggag
gattcccagatctgcaccgtgggacgcctctggatctcggttgcaaggtatcacattgag
gtgaacagggttcctgctggtaactgggtgctgattgagggcgtggaccagcccatagtg
aagacagcgactgtgacggagcctcggggcaatgaggaggctcagatcttccgtcccttg
aagttcaacaccacatctgttatcaaaatagctgtggagccagtgaacccctcagagctc
cccaaaatgttggatggtctccgcaaagtcaacaagagctacccctcacttacaactaag
gtggaagagtctggggagcacgtgatcctgggaacaggagagctgtacctggactgtgtg
atgcacgacctgcggaagatgtattccgagatcgacatcaaggtggctgatccagtggtg
acattctgtgagacagtggtggaaacatcttccctgaagtgctttgctgagacacccaac
aagaagaacaagatcacgatgattgctgagcccctggagaagggactggcagaggacatt
gagaacgaagtggtgcagataacctggaacagaaagaagctgggtgaattcttccagacc
aaatatgactgggacttgctggctgcccgttccatctgggcatttgggccagatgccact
ggcccaaacatcctggtagatgacacactgccatcagaggtggacaagtctctgctgggc
tcagtgaaagacagcatcgtgcagggcttccagtgggggaccagggaaggacccctctgt
gatgaattgatccgcaatgtgaagttcaagatcctggacgcggtgattgctcaggagccc
ctgcaccggggcggggggcagatcatccccacggcccgcagggtggtctactccgccttc
ctcatggccacccctcgcctgatggagccctactacttcgtggaggtccaggctcctgct
gactgcgtgtctgccgtgtacacggtgctggcccgccgcagaggccacgtgacacaggat
gctccgatcccaggctctcccctctacaccatcaaagccttcatccctgccattgattcc
tttgggtttgagacagacttgaggacccacacgcagggacaagccttctctctctctgtg
ttccaccactggcagattgtgcctggtgaccccttggacaagagcatcgtcatccggccg
ctggagccgcagccagccccacacctggccagggagttcatgatcaagaccaggcgtagg
aagggcctgagtgaggacgtgagcatcagcaaattctttgacgaccccatgttgctggag
ctggccaagcaagacgtcgttctcaactaccccatgtga
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