Ficedula albicollis (collared flycatcher): 101815024
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Entry
101815024 CDS
T02815
Symbol
PLXND1
Name
(RefSeq) plexin D1
KO
K06822
plexin D
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
101815024 (PLXND1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plexin_cytopl
Plexin_RBD
TIG
PSI
Sema
TIG_plexin
PSI_PlexinA-B
TIG_2
Insulin_TMD
DUF1381
Motif
Other DBs
NCBI-GeneID:
101815024
NCBI-ProteinID:
XP_016156850
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All DBs
Position
12:complement(21546792..21620286)
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AA seq
1518 aa
AA seq
DB search
MVTVLDSVVQGTGPACEKRNIQLQPEQLDCGAAHLQHPLAIVKPVTASPIFTYSRLTAVA
VASVNNYTVAFLGTASGGLLKINLDSTMKVISRRSISVAYGEPVHPIMQFDPSDSTYLYL
MTSYQMTRVKVAACSQYQTCRECLAAADAYCGWCTMETRCSLQHECANFTGTNFWASVSG
GVQQCPSMTILEPEINIDKENPALIIQINGTIPNLNGTNISCDYGNNIHTVARVAGDYVN
QFIYCSLLPHEKYPAFPDDQDHVVVEASLRVNNKNIIQANFTIYDCKRIGSIYPQRACTS
CLSARWKCHWCPSAYSCVSNHSQCEDALQMEQKKIDCPRIVPAPLEPMPTGVSRNIMISV
ANATFPKETALECHFGTDGTFEARWVNSSAVECVHVLLHTSEKSHRFPVNLQLKDKPDRF
IDSPEMMTVEVYNCATGSADCSQCLGREDLGHRCLWSEGSSSCRLQPEPPQLPGACPPPE
IRKIEPLRGPLEGGTLLTIRGRNLGRRFSDVVGAVRVGAVPCTPLPHRYSVSETVVCQTG
EAPEAFSDVVTVNVSREGRSRERYSYVLPVVQSISPPNGPKAGGTRVTIRGSRLDVGSEL
RVLINSSKQCTDLSRSDSSITCTMPAVELPGAVPVCVQFENKSCASHNITFKYEKNPVIS
DISPKKSQISGGRIITLEGRGFGLVQNVSMAVRGIGREHTRCQVHTDTAITCPSPAASNV
TAGAKPAPVDFYLNGRLYTDERSALDEELNPEEALHVSKFSLGYYADPQFSTAKKEKWIK
HHPGEPLTLVIHKEPDSLGLESNEYQVKIGLISCEIQIVSDKVIHCSINESLSSSERQLP
VTIQVGKFNYTIAMLHLGGGETAIIVSIVICSILLVLSVVALFVFCTKSRRAERYWQKTL
LQMEEMESQIREEIRKGFAELQTDMTDLTKELNRSQGIPFLEYKHFVTRTFFPKCSSLYE
ECYILPSQQLSSQLGSHVQETHPLLVGEWKIPENCRPNMEEGISLFSTLLNNKHFLIVFV
HALEQQKDFAVRDRCNLASLLTIALHGKLEYYTSIMKDLLVDLIDASASKNPKLMLRRTE
SVVEKMLTNWMSICMYSYLRETVGEPFFLLICAIKQQINKGSIDAITGKARYTLNEEWLL
RENIEAKPRNLNVSFQGCGMDSLSVRAMDTDTLSQVKEKILEAFCKNVPYSQWPRVEDVD
LEWFATSTDSYILRDLDDTSVVEDGRKKLNTLAHYKIPEGASLAMSLTDKKDTTLSRVKD
LDTEKYFHLVLPTDESVEHKKSHRQSHRKKVLPEIYLTRLLSTKGTLQKFLDDLFKAILS
IRDDKPPVAVKYFFDFLEEQAEKRGITDPDTLHIWKTNSLPLRFWVNILKNPQFVFDIDK
TDHIDACLSVIAQAFIDACSLSDLQLGKDSPTNKLLYAKEIPEYRKIVQRYYKQIHDMPP
LSEQEMNAHLAEESRKYRNEFNTNVAMAEIYKYAKRYRSQIVAALDANPTTKRTQLQHKF
EQVIALMEDNIYESCSEA
NT seq
4557 nt
NT seq
+upstream
nt +downstream
nt
atggtcaccgtgctggacagcgtggtgcagggcaccggcccggcctgcgagaagcggaat
atacagctgcagccggagcagctggactgcggggccgcacacctgcagcaccccctggcc
atcgtgaagcccgtcacagcctcccccatcttcacctacagccgcctgacggccgtggct
gtggccagcgtcaacaactacaccgtggccttcctgggcacggccagtggaggactcctg
aagattaacctggacagtacaatgaaggttattagcaggagatccatctcagtggcctat
ggagagcctgtccatcccatcatgcagtttgacccttctgattccacctacctctacctg
atgacctcttaccagatgacacgggtgaaggtggctgcctgcagccagtaccagacgtgc
agggagtgcctggctgccgctgacgcctactgcgggtggtgcaccatggagaccaggtgt
tctctgcagcacgagtgtgccaacttcacagggaccaacttctgggcaagtgtgagtggg
ggagtgcagcagtgcccttccatgaccatcctggagcccgagatcaacatcgacaaggag
aacccggccctgataatacaaataaatggaactatcccgaacttgaatggaacaaatatt
tcatgtgactatggaaacaacatccacacggtagccagagttgctggggattatgtaaac
caatttatttattgcagtttgcttccacatgagaaatatccagcatttcctgatgaccaa
gaccacgtggtcgtcgaagcttctctccgggtcaacaacaaaaacattatccaggccaat
ttcaccatctatgattgcaaaaggattggcagcatttacccacagagagcgtgcaccagt
tgcctctcagccaggtggaagtgtcactggtgcccctctgcctacagctgcgtctccaac
cactcccagtgtgaggatgcactgcagatggagcagaagaaaattgactgccctcggata
gtacctgcgcctttggagccgatgcccacgggtgtgtcccggaacatcatgatctcagtg
gccaatgcaactttccctaaggagacagctctggagtgccattttgggacagacgggaca
tttgaagcccggtgggtgaactcctctgccgtggagtgtgttcatgtgctgctccacaca
tcagaaaaaagccatcgcttcccagtgaacctccagctgaaggacaaaccagacagattt
atcgacagtccggagatgatgacagtggaggtgtacaactgcgccaccggcagcgccgac
tgctcgcagtgcctgggcagggaggacctggggcaccgctgcctctggagcgagggcagc
tccagctgccggctgcagcccgagcccccgcagctccccggggcctgtccccctccggag
atccgcaagatcgagccgctgcgtgggcccctggaggggggcactctgctgaccatccgc
gggaggaacctgggccggcgcttcagcgacgtggtgggcgccgtgcgcgtgggcgccgtg
ccctgcacgcccctgccccacagatacagcgtgtctgagacagtcgtgtgccagaccgga
gaggccccggaggcgttttcggatgtggtgacggtgaacgtgagccgggaagggaggtcc
agggagcgctactcctacgtgctccccgtggtgcagtccatatctcctccaaacggcccg
aaggcaggaggcaccagagtgaccatcagaggcagcaggctggacgtgggctcagagctc
cgtgtcctcatcaactcctccaagcagtgcacggacctcagccgcagtgacagctccatc
acctgcaccatgcccgctgtggagctccctggcgccgtgcccgtctgcgtgcagttcgag
aacaagtcctgtgccagccacaacatcaccttcaagtatgagaagaacccggttatatca
gacatcagccccaagaagagccagatcagcgggggcaggatcatcaccctggaaggaaga
ggctttgggctggtgcagaacgtgtccatggcggtgcgcggcatcggcagggagcacacg
cgctgccaggtgcacaccgacaccgccatcacctgcccctctcccgccgcctccaacgtc
acggcgggcgccaagccggcccccgtggatttctacctcaacgggcgcctctacacggac
gagcgctcggccctggacgaggagctgaaccccgaggaggccctgcacgtcagcaagttc
agcctgggctactacgctgacccccagttctccacggccaagaaggagaagtggatcaag
caccatcccggcgagcccttgactctggtcatacataaagagcctgacagcctgggcctg
gagagcaatgagtaccaggtgaaaatcggcctgatctcgtgtgagatccagattgtttca
gacaaagtcatccactgctccatcaacgagtcgctgagctcctcggagcggcagctgccc
gtgacgatccaagttggaaagttcaactacacgattgccatgctgcacctcggcggaggc
gaaaccgcgatcatcgtctccatcgtcatctgcagcatcctgctggtcctctctgtcgtg
gctctctttgtgttctgcacaaagagccgcagagctgagcgctactggcagaaaacgctg
ctccagatggaggagatggagtctcagatccgggaggaaatccgcaaaggttttgcagag
ctgcagacagacatgacagacctgaccaaggagctaaaccgcagccaggggatccccttc
ctggagtacaagcactttgtcaccaggacattcttccccaaatgttcctctctctacgag
gagtgctacatcctgccatcccagcagctcagctcacagctgggctcccacgtccaggaa
acacacccactgctggtgggggaatggaagatccctgagaactgcagacccaacatggaa
gaaggaatttctctgttctccaccttactcaacaacaagcacttcctcattgtgtttgtc
catgctctcgagcaacagaaggactttgctgtcagagacaggtgtaacctggcctccctg
cttactattgcactgcatgggaaactggagtattacaccagcatcatgaaggacctcctt
gtggatctaatagatgcttcagcttccaaaaaccccaagcttatgctgaggaggacagag
tctgtggtggagaagatgctcaccaactggatgtccatctgcatgtacagctatctcaga
gagacagttggagagcccttcttcctgctgatctgtgccatcaaacagcagatcaacaag
ggttccatcgatgccattacagggaaggccaggtacaccctcaatgaggagtggctgctg
agggagaacatagaggcaaagccaaggaacctcaacgtctccttccaaggctgtgggatg
gactccctgagtgtcagagccatggacacagacacactcagtcaagtgaaagagaaaatt
ctggaggccttctgcaagaacgtcccctactcccagtggccgagggtggaagacgtcgac
ctcgagtggtttgccaccagcaccgacagctacatcctgcgggacctggatgacacctcg
gtggtggaggacggcaggaagaaactcaacacgttagcacattacaagatccctgaaggg
gcatccctggccatgagtttgacagacaagaaggacaccacgctgagcagagtgaaggat
ttggacactgagaagtacttccacttggttctcccaactgacgaatcagtggaacacaag
aagtcccacagacagagccataggaagaaggttcttccagagatctacctgacacggctg
ctgtccaccaagggcacactgcagaagttcctggatgacttgttcaaagccattctcagt
atccgggacgacaaaccacccgtggctgtgaagtatttctttgacttcctagaggaacag
gcagagaagagagggatcacagaccctgacactctgcacatctggaagaccaacagccta
ccactgaggttttgggtgaacatcctgaaaaacccgcagtttgtcttcgacattgacaag
acagatcacattgacgcctgtctgtccgtgattgcccaggccttcatcgacgcctgctcg
ctctctgacctgcagctgggcaaggactccccgaccaacaagctgctgtatgccaaggag
atccccgagtaccggaagatagtgcagagatactacaagcaaatccacgacatgccccct
ctgagcgagcaggagatgaacgcccacctggccgaggagtcgcggaaataccgaaacgag
ttcaacaccaatgtggccatggctgagatatacaaatatgccaagagataccgctcccag
attgtggctgccctggatgcaaaccccacgacaaagcgcacccagctgcagcacaaattt
gagcaagtgattgcactcatggaggacaacatctatgagtcctgcagtgaagcctag
DBGET
integrated database retrieval system
