Ficedula albicollis (collared flycatcher): 101815311
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Entry
101815311 CDS
T02815
Symbol
PRDM6
Name
(RefSeq) PR/SET domain 6
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab00310
Lysine degradation
fab01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
101815311 (PRDM6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fab03000
]
101815311 (PRDM6)
03036 Chromosome and associated proteins [BR:
fab03036
]
101815311 (PRDM6)
Enzymes [BR:
fab01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
101815311 (PRDM6)
Transcription factors [BR:
fab03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
101815311 (PRDM6)
Chromosome and associated proteins [BR:
fab03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
101815311 (PRDM6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-H2C2_2
zf-C2H2_4
SET
Zap1_zf1
zf-C2H2_11
zf-C2H2_jaz
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
101815311
NCBI-ProteinID:
XP_016160664
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Position
Un
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AA seq
553 aa
AA seq
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MLKPGDPGGSAFLKVDPAYLQHWQQLFPQSSQLKSSGPLAQLQPPERAEPPADNLRQRPT
SLSSASSSSSSSTPSSSSTSSCVAAAAASLAGLTALPVTQLPVFGPLQSSELPAGGAPAP
LQGKDLCGAGSGGGKCGDRGAGRYRCTAEELDYYLYGQQRMEIIPLNQHTSDPNNRCDMC
ADNRNGECPMHGPLHSLRRLVGTSSAAAGGCTVPGLAYGICAAQRIQQGTWIGPFQGILL
LPEKVQAGAVRNTQHLWEIYDQDGTLQHFIDGGEPSKSSWMRYIRCARHCGEQNLTVVQY
RSNIFYRACIDIPRGTELLVWYNDSYTSFFGIPLQCIAQDENLNVPSTVMEAMSRQDTLQ
PFNKSSKLSPATPQRSVVFPQTPCSRNFSLLDKSGSIESGFNQISVKNQRVLASPTSTSQ
LNSEFSDWHLWKCGQCFKTFTQRILLQMHVCTQNPDRPYQCGHCSQSFSQPSELRNHVVT
HSSDRPFKCGYCGRAFAGATTLNNHIRTHTGEKPFKCERCERSFTQATQLSRHQRMPNEC
KPITESTESIEVD
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagcccggagatcccggcggatccgcgttcctgaaggtggatcccgcctatctg
cagcactggcagcagcttttcccgcagagtagccagctgaaaagcagcgggcccctcgcc
caactccagccgcccgagagagccgagcccccggctgacaatctccgccagcgcccgacc
tccctctcctccgcctcctcctcctcttcctcgtccactccgtcttcctcctccacctcg
tcctgcgtcgctgctgcggcggcttctctggctggtctcaccgccctgcctgtgacccag
ctcccggtcttcgggccgctgcagagctcggagctcccggccgggggagcgccggctccc
ctgcagggcaaggatttgtgcggggccggcagcggcggcggcaaatgcggcgaccgtggt
gccggtcggtaccgctgcacggccgaggagctggactactacctgtacgggcagcagcgc
atggagatcatccccctgaaccagcacaccagcgaccccaacaaccggtgcgacatgtgc
gctgacaaccggaacggcgagtgccccatgcacggcccgctgcactcgctgcggcggctg
gtgggcaccagcagcgcggccgccgggggctgcaccgtgcccggcctggcctacggcatc
tgcgccgcgcagcgcatccagcagggcacctggatcgggcccttccagggaatcctgctc
ctgccggagaaggtccaagccggcgccgtcaggaacacgcagcacctctgggaaatatac
gaccaagatgggaccctgcagcactttattgatggtggagagcccagcaagtcaagctgg
atgaggtacatccgctgcgccaggcactgtggggagcagaacctgacagtggttcagtac
aggtcaaacatattctaccgggcttgtatagatatccccaggggcactgagctgttagtg
tggtacaatgacagctacacatctttctttggaatccctctccagtgcattgcacaagac
gaaaatttgaatgtcccttcgactgtaatggaggccatgtccagacaagacaccctacag
ccatttaataaaagtagcaaactatcccctgccactccacagcgatccgtagtatttcca
cagactccgtgtagcagaaatttttctctcctggataagtctgggtccatcgagtcagga
tttaaccagatcagtgtcaaaaaccaacgagttcttgcaagcccaacttcaacaagccaa
ctaaattctgagttcagtgactggcatctttggaaatgtgggcaatgctttaagactttc
acccagcggatcctcttacagatgcatgtgtgtacacagaaccccgacaggccctaccag
tgcggccactgctcccagtccttctcgcagccgtcggagctgaggaaccacgtggtgacg
cactccagcgacaggcccttcaagtgcggctactgcgggcgcgccttcgcgggcgccacc
acgctcaacaaccacatccggacgcacaccggggaaaagcccttcaagtgcgagaggtgt
gagaggagcttcacacaagccacccagctgagtcgacaccagaggatgcccaatgagtgc
aagccaataacagagagcacagaatcaattgaagtggattaa
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