Ficedula albicollis (collared flycatcher): 101817397
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Entry
101817397 CDS
T02815
Symbol
TNFAIP3
Name
(RefSeq) TNF alpha induced protein 3
KO
K11859
tumor necrosis factor, alpha-induced protein 3 [EC:
3.4.19.12
]
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab04217
Necroptosis
fab04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
101817397 (TNFAIP3)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
101817397 (TNFAIP3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
fab01002
]
101817397 (TNFAIP3)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fab04121
]
101817397 (TNFAIP3)
Enzymes [BR:
fab01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
101817397 (TNFAIP3)
Peptidases and inhibitors [BR:
fab01002
]
Cysteine peptidases
Family C64
101817397 (TNFAIP3)
Ubiquitin system [BR:
fab04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
101817397 (TNFAIP3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-A20
OTU
OTU_Vertnin
Motif
Other DBs
NCBI-GeneID:
101817397
NCBI-ProteinID:
XP_005043789
UniProt:
U3KEG7
LinkDB
All DBs
Position
3:50775801..50789235
Genome browser
AA seq
809 aa
AA seq
DB search
MSSRNMAGQHILPQALYQSNMLKAMKIRERTPEDLVKPPSGIIHHFRTMHRYTIEMFRMC
QFCPQFRETLQKSLTDQATQASLERQRKLNWCREVRRLVPLKTNGDGNCLMHAASQYMWG
IEDIDLVLRKTLFSALREIDTRNFKLRWQREAVKSQEFVETGLRYDTRNWEEEWEYLIEM
TSPEISGARNRLPYNALEEIHIFILANILRRPVIVLADKVVRSLESGSSFAPLNVGGVYL
PLLWPAEECYRYPIVLGYDNMHFTPLVTLKDSGPEIRAVPLVTSEQGRFEDLNVHFLTDA
EEREKEQLLKEYLIVIEIPVQGWDHGTTHLINAAKLDEGNLPKEINLVEDYFQLVQHEYK
KWQENAEPGRRDTCSRNRQELSLSQLSLLQMKCETPNCPFYMSVNTQPYCHECFEQRSQG
SKGRKQPSKAAPEKLKAAGSGSSRGDICEPGGWTSEGPVTEPRSAPPTAPSLFLYSETTA
MKCRTPDCPFTLNVHHNGLCERCYNSRQLSPCNNLDDQRHLDYATCKMCRQKAKRTFNGI
CSTCFKRSTEQSPSGSPAFLPTCHQRSTSDPSQISQILHQHSCHQAPNSHGKEPPPPALP
PEENRGGNLCRKPGCKFFGTPQNEGFCTLCFFEYRENHDSVLLRHQRRSQKKSSAADQTG
SSAAAFRNTVSCQRRDCGTLGSTMLEGYCQNCFIIAQNQRFQEARRTEEQLVRQPERTGQ
HRDAQRAALSTQRRQCAVASCRNSPACRSDDLCPECRRLGQLPPSGSAREPAAQEPPKQR
CRAPACDHYGNAKCNGYCNECYQFKQIYG
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctagaaacatggctggccagcacatccttcctcaagctttgtatcagagcaat
atgctgaaggctatgaagatcagagagaggacacctgaggatctagtcaaacctcccagt
ggaataattcatcacttcaggactatgcacagatacaccatagaaatgttcagaatgtgc
cagttttgtccccagtttcgggaaacgcttcagaagtccctgactgaccaggctacccag
gcttcactggagcgccagaggaagctcaactggtgcagggaagttcggagacttgttcct
ttgaagactaatggtgatggaaattgccttatgcatgctgcatcgcagtacatgtggggt
attgaggacatcgaccttgtcttaagaaaaacactgttcagtgctctcagggagattgac
acacggaacttcaagctccgctggcagcgggaggctgttaagtcccaggagtttgtggaa
acaggactccgttatgacacccggaactgggaggaggagtgggaatacctcattgaaatg
acctccccagaaatatctggggctcgaaacagacttccctataatgcactggaagaaatt
cacatcttcatccttgctaacatcctcagaaggccagtcattgtccttgcagataaagtg
gttagaagtttagagtcaggctccagttttgctcctctgaatgttggtggtgtttacttg
cctctcctgtggccagctgaagaatgctacagatacccaattgtgcttggctatgacaac
atgcattttacgccactggtgactctgaaggacagcggaccagaaatccgggctgtccct
ctggtcaccagtgaacaaggccgatttgaggatttgaatgtgcactttctgacagatgca
gaagagagggagaaagagcagctgctaaaagagtacttgatagtgatagaaattccagtg
caaggctgggatcatggtacaactcatctaattaatgctgcaaagttagatgaaggcaac
ctacccaaagaaataaacctcgtggaagattactttcaactggtacagcatgagtacaag
aagtggcaggagaatgctgaacctggtagaagagacacatgttccaggaacagacaggag
ctgtcactttcccagctctccctcttacagatgaaatgtgaaacgccaaattgccctttc
tacatgtctgtgaacacccagccctactgccacgaatgctttgagcagaggtcccaagga
agcaaaggaagaaagcagccctccaaagcagcacctgagaagctgaaggcagctgggtca
ggctcctcccgtggggatatttgtgaacctgggggttggacatctgaagggcctgtcaca
gagcctcgctctgcacctccgaccgctccgagccttttcctgtacagtgaaaccacagcc
atgaagtgcaggaccccagactgccccttcacgttgaatgtgcaccacaacgggctgtgt
gaacgctgctacaactccagacagctcagtccctgcaacaacttggatgaccagagacac
ttagactatgccacgtgcaaaatgtgccgtcaaaaggccaagaggaccttcaatggtatt
tgcagcacttgcttcaaaaggtctacagagcagtccccaagtggcagtcccgctttcctg
cccacctgccaccagagatcaacatctgacccgtcccagatctcacagatcctccaccag
cactcctgccatcaggctcccaacagccatggcaaggagcccccaccaccagcactgcct
cccgaggagaacaggggaggcaacctctgtaggaaacctggttgcaagttttttgggaca
ccacaaaatgagggcttttgcacgctgtgtttctttgagtacagggaaaaccatgacagt
gttttgctgcgccaccagaggagatctcagaagaagtcttcggcagcagatcagacgggg
agctccgctgccgccttccgtaacactgtgtcctgccagcggcgcgactgcggcaccctg
ggcagcacaatgctcgagggctactgccagaactgcttcattatagcccagaaccagcgg
ttccaagaagccagaaggacagaagaacagctggtgagacaaccagaaagaacagggcag
cacagagatgcgcagcgagcagcattgagtacccagaggaggcagtgtgctgtggcttcg
tgcagaaacagcccggcctgcaggagcgatgacctgtgcccggagtgccggcgcctcggc
cagctgccgccgtcggggagtgccagggagccggcggcacaggagcctcccaagcagcgc
tgccgagcccctgcctgtgatcactatggcaatgccaagtgcaacggctactgcaatgag
tgctaccagttcaaacagatctatggctag
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