Ficedula albicollis (collared flycatcher): 101817511
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Entry
101817511 CDS
T02815
Symbol
APAF1
Name
(RefSeq) apoptotic peptidase activating factor 1
KO
K02084
apoptotic protease-activating factor
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab04115
p53 signaling pathway
fab04210
Apoptosis
fab05164
Influenza A
fab05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
101817511 (APAF1)
04115 p53 signaling pathway
101817511 (APAF1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
101817511 (APAF1)
05168 Herpes simplex virus 1 infection
101817511 (APAF1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_IFT122_1st
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
APAF1_C
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
EIF3I
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
WHD_APAF1
NB-ARC
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_Aladin
NBCH_WD40
Beta-prop_WDR41
CARD
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
Beta-prop_NOL10_N
DSE1_N
Beta-prop_VPS8
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
Beta-prop_NWD2_C
WD40_RFWD3
eIF2A
PEP5_VPS11_N
CARD_2
Beta-prop_NUP159_NUP214
ASA1
Ge1_WD40
Beta-prop_SCAP
WD40_like
Tricorn_2nd
Beta-prop_RSE1_2nd
Beta-prop_DCAF4
Beta-prop_ACSF4
Beta-prop_DCAF12
Beta-prop_Nup120_160
WDR54
TRM82_WD
Beta-prop_WDR11_2nd
AAA_16
WHD_Dark
DUF2415
PAC11
nSTAND6
AAA_22
Motif
Other DBs
NCBI-GeneID:
101817511
NCBI-ProteinID:
XP_005039610
UniProt:
U3K8W9
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All DBs
Position
1A:46959676..46991722
Genome browser
AA seq
1248 aa
AA seq
DB search
MDVKSRNYLLMNRQALENDIKTSYIMDRMISDEVLTLQEEERVKQQNTRKERAAMLINII
LTKDNNSYRSFYNALLHEGYRDLAALLQDGIPAVSSGNRKSSMDGMTSYVKTILCEGGVP
QRPVVFVTRPKLVDAIKKKLYCLGSDPGWVTVYGMAGCGKTVLTAEALRDPQLLEDYFPG
GFHWISVGKQDKAGLLIKLQNLCSRLEHDSTLSQRPLNIEEAKDRLRLLMLRKYPRSLLV
LDDIWDSWVLKAFDNQCQVLITSRDRSVTDAVAGNKYEVHVESGLAHEKGLEILSLFVNM
KISELPEQANSLVRECKGSPLVISLIGALLRDFPSRWEYYLRQLQNKQFKRIRKSSSYDY
EALDEAMSISVEQLDDNYKDYYKDLSILPKDVKVPTKVLCILWDMETEEVEDILQEFVNK
SLLFCDRNGKSFHYYLHDLQLDFLTEKNRNQLQELHKNIVNQYKKYYKLNTPVLSQEDCM
YWYNFLAYHMAGAKMEQELRDLLFSLDWIKAKTELVGPAHLIHEYVEYSSILDQKDSTVR
ENFQEFLSLNGHLLGRQPFPDIIQLGLCQPETSEVYQQAKLHAQRETGTFYLEWINKKSL
KNLYRLVVRPHRDAVYHACFSEDRQRIASCGADKTLQVFKAESGERLLEINAHDDEILCC
AFSADGEFVATCSSDKKVKVWNSRTGQCKCVYEEHSEQVNCCQFNNKSGQYLLATCSNDT
YIKIWDLNKKYCRNTMIGHDNSVNHCRFSPNDEYVASCSTDGTVKLWEARSGNELKSIEI
KDFFKNADEQPDDVEVLVKCCSWSRNGNMILVAAKNKLLLFDIETCGLLTQVIVSHHSTI
QYCDFCPGDELVAVALSHCSVELWNIKSLSKVAYCRGHTSWVHCVTFSPDGSLFLTSSDD
QTIRIWETKKVCKSSDAVLKSELDVVFHNGEVMILAIYNQKNLQLINGNTDNVIMQTAAQ
ESPISCCCLSEDLKFAAFGLESGTIKVLQLSDGKVLNSWEAYRTSVQHCRFTPDCQTLIL
SAHDSIIQVWNWKLSGCVFLRGHKEAIKDFRLLENSKILSWSFDGTVKVWNITTGNLEKD
FACHGGAVLSCAVSPDGSKFSSASADKTAKIWSFESSSVLHELKDHEACVRCCTFSPNNT
LLATGDDKGEIRIWDALTGALLHFCSPVTVDEGESTHVGWVTDLSFSPDSKMLVSSGGYL
KWWNVNTGESLQTFYTNGTNLKSIHVSPNFKVYVTVDNLGILYVLQKF
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcaagagtagaaactatttgcttatgaatcgtcaagcactggaaaatgacatc
aagacttcttatattatggatcgtatgatttctgatgaagtactaacattacaggaggag
gagagagtgaagcaacagaatacacggaaggagcgagcagctatgctaataaacattatt
cttacaaaagataataattcatatagatccttttataatgcactgctccatgaagggtac
agagatcttgctgcacttcttcaggatggcatccctgctgtctcgtctggtaacagaaag
agttcaatggatggaatgacttcctacgtgaagaccattctctgcgaagggggcgtacca
cagagaccagttgtgtttgtcactcgaccaaaactggtagatgctattaaaaagaaactg
tactgcttgggaagtgatccaggttgggtgacagtttatggaatggcaggctgtgggaag
actgttttaacagcagaagctctaagggatcctcagctcttggaagattactttccagga
ggatttcattggatctctgttgggaaacaggacaaagcagggctcctcataaaacttcag
aatctctgtagtagattggaacatgactccactctttcacaaagaccacttaacattgag
gaggctaaagatcgtcttcgtttgctgatgttacgcaaataccccaggtctcttttggtc
ctggatgacatttgggattcttgggtgttaaaagcatttgataatcaatgtcaggtactc
atcacgagcagggacaggagtgtaacagatgctgtggctggcaataaatacgaggttcat
gtggaaagtggactagcacatgagaaaggactggagattttatccttatttgtgaatatg
aaaatatcagaacttccagaacaagctaactctcttgtaagagaatgcaaaggttctccc
ctggtgatatccctgataggtgcattactacgagacttccctagccgctgggaatactat
ctcaggcagctgcagaataaacagtttaaaagaataagaaaatcttcctcctatgattac
gaagcccttgatgaagcaatgtccataagtgttgagcagctggatgacaattacaaagac
tactataaagacctctctatcctcccaaaagatgttaaagtacctactaaggttctctgt
attctttgggatatggaaactgaagaagttgaagatatactacaggagtttgttaacaaa
tcactgttgttctgtgatcggaatgggaagtcattccattattatttacatgatcttcag
ctggactttctcacagagaagaatcgcaaccagcttcaggagctacataaaaacatagta
aatcagtacaagaaatactacaagcttaatacacctgttctgtctcaagaggattgcatg
tactggtataactttctagcatatcacatggcaggtgccaaaatggagcaggagctccgt
gatcttttgttttctttagattggattaaagctaaaacagaattggtagggcctgctcat
ctgattcatgaatatgtagaatatagttcaatcctggatcaaaaggacagcacagtgcgt
gagaatttccaggaatttctgtctttaaatgggcaccttcttggacggcagccatttcct
gacatcattcagctgggtctttgccagccagagacatcagaggtgtatcaacaggccaag
ctacatgctcaaagagaaacaggaacattttatttggagtggataaataaaaaatccttg
aaaaatctctaccgcctggttgttcgtccacacagagatgcagtttaccatgcttgcttt
tctgaggacagacaaagaatagcatcatgtggagctgataaaacacttcaggtgtttaaa
gcagaaagtggagagagactcctggagataaatgcccacgatgatgaaatactctgttgc
gctttttctgcagatggtgaatttgtagcaacttgttcaagtgataaaaaagtcaaggtc
tggaattcaagaacaggccagtgtaagtgtgtatatgaagaacactccgagcaggtcaat
tgttgccagttcaataacaaaagtggtcagtaccttctagccacctgctcaaatgacact
tacatcaaaatttgggatttgaataaaaaatactgtagaaatacgatgataggtcatgac
aattctgtcaatcactgcagattttcaccaaatgatgaatatgttgctagctgctcaaca
gatggaacagtaaagctttgggaagcacgctcaggaaatgaactgaaaagtattgagata
aaagatttcttcaaaaatgctgatgagcaaccagatgatgtggaggttttagtaaaatgt
tgctcttggtccagaaatggtaacatgattttggtggcagccaaaaataagcttttgctt
tttgatattgaaacatgtggtttgttaactcaagtcattgtcagtcatcacagcacaatc
caatactgtgacttctgtcctggggatgagttagtagcagttgccttgtctcactgttct
gttgagttatggaatattaagtctttatcaaaagtggcatattgcagaggacacacgagc
tgggttcactgtgtgacattttcaccggatggatctttatttctgacttcatctgatgac
cagacaatacgtatctgggaaacaaagaaggtgtgcaagtcctctgatgctgtgctgaaa
agtgaactagatgttgtgtttcacaatggtgaagtgatgattttagccatctacaatcag
aagaatttacaacttatcaatggaaatacagacaatgttattatgcagacagcagcccaa
gaatcccccatttcctgctgttgcttaagtgaagatcttaaatttgcagcttttggactg
gagagtggaacgataaaggtactacagttgtcagatgggaaggttctgaactcctgggag
gcctacaggacatctgtgcagcattgtcgatttacacccgattgtcagactctcatctta
agtgctcatgattcaattatacaggtgtggaattggaaattgagcggatgtgtgtttcta
agaggacacaaggaagccatcaaggattttagacttctggaaaattcaaaaattctctct
tggtcatttgatggaaccgttaaggtttggaatatcactactggaaatctagagaaagat
tttgcttgtcatggaggtgctgttctttcctgtgctgtttcacctgatggtagtaaattt
tcatctgcttctgctgacaaaactgcaaagatatggagctttgaaagttcatctgttctt
catgagctgaaagaccatgaagcctgtgtgcggtgctgtactttctctcctaataacaca
ctattggccactggagatgacaaaggagaaataaggatttgggatgctttaacaggtgca
ttacttcatttctgctccccagttactgtagatgaaggagaatcaacacatgtgggttgg
gtaacagacctctccttttctcctgacagtaaaatgcttgtatcatctggaggctatctt
aagtggtggaatgtaaatactggagaatccttacaaaccttctacacaaatggaacaaac
ctcaagtcaatacatgtgtcccctaatttcaaagtatatgtgactgttgataatcttggt
attctttatgtattacagaagttctga
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integrated database retrieval system
