Ficedula albicollis (collared flycatcher): 101819642
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Entry
101819642 CDS
T02815
Symbol
RFNG
Name
(RefSeq) RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab00514
Other types of O-glycan biosynthesis
fab04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
101819642 (RFNG)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
101819642 (RFNG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
fab01003
]
101819642 (RFNG)
Enzymes [BR:
fab01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
101819642 (RFNG)
Glycosyltransferases [BR:
fab01003
]
Glycan extension
O-Glycan
101819642 (RFNG)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
101819642
NCBI-ProteinID:
XP_016158211
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Position
18:complement(12996244..13003701)
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AA seq
212 aa
AA seq
DB search
MINTNCSAVHTRQALCCKMSVEYDKFLESGQKWFCHVDDDNYVNPRTLLHLLSAFSHSQD
VYVGRPSLDHPIEAADHVQSDGSKTTVKFWFATGGAGFCISRGLALKMSPWASTAERVRL
PDDCTIGYIIEGLLEVKLLHSPLFHSHLENLQRLQGESVLQQVTLSYGDPENKHNVVSVG
GVFGLQQDPTRFKSVHCLLYPDTIWCPAKKMS
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacaccaactgttctgctgtccacacccggcaagctctgtgctgcaagatgtct
gtggaatatgataaattcctggaatctgggcaaaaatggttttgccatgtggacgatgac
aattatgtgaaccctcggactctcctacatctcttgtctgccttctcacatagccaggat
gtctatgtggggcgaccgagtctggaccaccccatcgaggcagctgaccatgtccaaagt
gatggatcaaagacaacagtgaaattctggtttgccacaggtggagctgggttctgtatc
agccgaggtcttgccctgaagatgagtccctgggccagtactgcagaaagagtgcgtctt
cctgacgactgcacaatcggctacatcatcgaagggctgctggaggtgaagctgctgcac
agccctttgttccattcccacctggaaaacctgcagagactgcagggcgagtctgtgctg
cagcaggtaaccctgagttacggcgaccctgagaacaaacacaatgttgtgagtgtggga
ggagtgtttggccttcagcaagatccaacccgatttaaatctgtccattgtctgctttat
cctgacactatttggtgccctgctaagaagatgtcataa
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