Ficedula albicollis (collared flycatcher): 101819991
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Entry
101819991 CDS
T02815
Symbol
TRPC6
Name
(RefSeq) transient receptor potential cation channel subfamily C member 6
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
101819991 (TRPC6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
fab04040
]
101819991 (TRPC6)
Ion channels [BR:
fab04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
101819991 (TRPC6)
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Ank_5
Cas8b_C
Cmr1_C
Motif
Other DBs
NCBI-GeneID:
101819991
NCBI-ProteinID:
XP_005038258
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Position
1:80084718..80113706
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AA seq
818 aa
AA seq
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MFNDHSTSLSLEEERFLDAAEYGNIPVVRKMLEECPSLNVNCVDYMGQNALQLAVANEHL
EITELLLKKENLARVGDALLLAISKGYVRIVEAILSHPAFAEGKRLALSPSQSELQHDDF
YAYDEDGTRFSHDVTPIILAAHCHEYEIVHTLLRKGARIDRPHDYFCKCAECGQKQRHDS
FSHSRSRINAYKGLASPAYLSLSSEDPVMTALELSNELAVLANIEKEFKNDYKKLSMQCK
DFVVGLLDLCRNTEEVEAILNGDVEMSHNNGEHGRPSLSRLKLAIKYEVKKFVAHPNCQQ
QLLSIWYENLSGLRQQTMAVKFLVVLAVAVGLPFLSMAYWIAPCSKLGRIMRGPFMKFVA
HAASFTIFLGLLVMNAADRFDGTKLRPNETTDNVKQLFRMKTSCFSWMEMLIISWVVGMI
WSECKEIWSQGPKEYLFELWNMLDFGMLAIFAASFIARFMAFWHASRAQNIVDANMKDLT
SPTLEPNIKYYTLARINWDPSDPQIISEGLYAIAVVLSFSRIAYILPANESFGPLQISLG
RTVKDIFKFMVIFIMVFVAFMIGMFNLYSYYLGAKQNEAFTTVEESFKTLFWAIFGLSEV
KSVVINYKHKFIENIGYVLYGVYNVTMVIVLLNMLIAMINSSFQEIEDDADVEWKFARAK
LWFSYFEEGRTLPVPFNLVPSPKSLLYLLIRIKKCISKPFLCQKKSFQEDAEMNKLGQRK
QSSIRSSDEIHLNSLNNPPRQYQKIMKRLIKRYVLKAQIDKESDEVNEGELKEIKQDISS
LRYELLEEKSQNSEDLAELIRKLGEKLSLDSKEEESKR
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgttcaatgaccactccaccagcctgtccctggaggaggagcgcttcctggacgccgcc
gagtacggcaacatccccgtggtgcgcaaaatgctggaagagtgcccctcgctcaacgtg
aactgcgtggactacatggggcagaacgccctgcagctggcggtggccaacgagcacctg
gagatcaccgagctgctgctgaagaaggagaacctggcgcgggtgggcgacgccttgctg
ctggccatcagcaaaggctacgtccgcatcgtggaggccatcctgagccaccccgcgttc
gccgagggcaagcggctggcgctgagccccagccagtcggagctgcagcacgacgacttc
tacgcgtacgacgaggacggcacgcgcttctcgcacgacgtgacgcccatcatcctggcg
gcgcactgccacgagtacgagatcgtgcacaccctgctgcgcaagggagcgcgcatcgac
cggccccacgactacttctgcaagtgcgccgagtgcggccagaagcagaggcacgactcc
ttcagccactccagatccaggatcaacgcctacaaaggcctggccagccccgcctatctg
tctttgtccagcgaggaccctgtcatgactgccttagagctcagcaatgagctggccgtg
ctcgccaacatcgaaaaagagttcaagaatgattacaagaaactgtctatgcaatgcaaa
gattttgtagttggactgcttgatttgtgcagaaatacagaagaagtggaagctattttg
aatggtgatgtggagatgagccataataatggagagcatggtcgtcccagcctcagccgc
ttaaaactcgccatcaagtacgaggttaaaaaatttgtagcacatccaaactgccagcag
cagctcctctcgatctggtatgagaatctgtcgggcttgcggcagcagacgatggcagtg
aagtttctggttgtccttgcagtcgcagtgggactgcccttcctctccatggcctattgg
attgctccttgcagtaagctggggaggataatgcgtggaccattcatgaagtttgtagcc
catgcagcctctttcaccatttttcttggtctgcttgtcatgaatgcagctgacaggttt
gatggcaccaaactccgacctaatgaaacaacagacaatgtaaaacagctttttaggatg
aaaacatcctgtttctcgtggatggagatgcttattatttcttgggtagtaggcatgata
tggtctgaatgtaaagaaatttggtctcaaggtccaaaggaatacctgtttgagttatgg
aatatgcttgattttggtatgttagcaatttttgcagcatcatttatagcaagatttatg
gcattttggcatgcatccagagcccagaacatcgttgatgcaaatatgaaagatctgaca
agtccaacactggagcccaacataaaatactacaccttggccagaataaactgggatcca
tctgatcctcagatcatttctgaagggctgtatgcaattgcggtggtgctaagtttctca
cggatagcctacatcttaccagctaatgaaagctttgggccactgcagatatcacttggg
agaaccgtgaaagacatcttcaagttcatggtgatatttatcatggtctttgtggctttc
atgataggcatgtttaatctctattcctactatctgggggcaaaacaaaatgaagcattc
acaactgttgaagaaagtttcaagacattgttctgggctatatttggactctcagaagtg
aaatcagttgttatcaattataaacacaaatttattgaaaatattggttatgttctttat
ggagtctataatgttaccatggtcatcgtcttgctgaacatgcttatcgcaatgattaac
agttcattccaggaaattgaggatgatgctgatgtagaatggaaatttgcaagggctaaa
ctttggttttcttactttgaagaagggagaactcttccagtacccttcaacttagtgcca
agcccaaaatctttgttgtatctcctaatcagaatcaaaaaatgcatttctaaaccattt
ttgtgccaaaagaaaagctttcaggaagatgcagagatgaacaagcttggtcaaaggaag
caatcaagtataagaagctcagatgaaatccatttaaacagtttaaacaatcctccaaga
caataccagaaaataatgaagcgtcttattaaaagatacgtgttgaaagctcagatagat
aaggaaagtgatgaagtcaatgaaggtgaattgaaggaaattaaacaggacatctcaagt
ctccggtatgaactccttgaggagaaatctcagaattctgaagatctggcagaactcata
aggaaacttggggaaaaactgtcacttgactctaaggaagaagaaagcaagagataa
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