Flavobacterium agricola: K5I29_08920
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Entry
K5I29_08920 CDS
T09474
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
fag
Flavobacterium agricola
Pathway
fag00300
Lysine biosynthesis
fag00550
Peptidoglycan biosynthesis
fag01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
fag00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
K5I29_08920
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
K5I29_08920
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fag01011
]
K5I29_08920
Enzymes [BR:
fag01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
K5I29_08920
Peptidoglycan biosynthesis and degradation proteins [BR:
fag01011
]
Precursor biosynthesis
Amino acid ligase
K5I29_08920
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
YqeC
CbiA
MobB
DUF6305
KTI12
AAA_15
LpxK
Motif
Other DBs
NCBI-ProteinID:
UYW00656
UniProt:
A0ABY6LWL1
LinkDB
All DBs
Position
complement(1792457..1793917)
Genome browser
AA seq
486 aa
AA seq
DB search
MKVLKDILYKVAIQAVHGSTHIEINKIVFDSRNVNAHDVFVAIKGTLTDGHLYIDKAIAL
GAKAIICEQLPEQLQQQITYVVVQNASEALAYMSANYYNEPSSKLKLVGVTGTNGKTTVA
TLLYQLFTNAGYKVGLISTVKILVHTTEYKTNHTTPDSVLINYYLNEMVTQGCEFCFMEV
SSIGIDQHRTTALDFAGGIFTNLSHDHLDYHHSFAAYRDAKKAFFDQLSKNAFAITNADD
KNGALMLQNTAAKKFNYAIKTYANYQAKILENHFSGLLLRIDNHEVWSKLVGNFNAYNLL
AIYATAINLGLPQAEVLRLISELNSVTGRFQYVVSPNQITAIVDYAHTPDALENVLKTIK
EIRTKNENIITVVGCGGDRDKTKRPEMAKIAAQYSNKVIFTSDNPRTENPQTILDEMEKG
VPAEYFNKTLSILDRKQAIKAACQMANAKDIILIAGKGHETYQEINGVRHDFDDFKIVTE
FLFVNQ
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagtattaaaagacatattatataaagttgccattcaggcagtgcatggatcaaca
catatcgaaatcaataaaattgttttcgattctagaaacgtgaatgcgcatgatgtgttt
gttgctattaaaggaacattaaccgacgggcatctttatattgataaagcaattgcttta
ggtgcaaaagccataatatgtgagcagcttccggagcagttacaacaacaaataacatat
gttgtggtacaaaatgcaagcgaagctttggcttatatgagcgcaaattattacaacgag
ccgtcaagcaaattaaaattagttggcgtaacgggtaccaacggcaaaacaacggtagca
actttgttgtatcaattgtttaccaatgcggggtataaagtcggtcttatttctactgta
aaaatattggttcatactaccgaatataaaaccaatcataccacgcccgatagcgtttta
ataaattattatttaaacgaaatggtaactcagggctgcgaattttgttttatggaagta
agctcgatcggaattgatcagcatcgtacaacagctttagattttgctggcggaattttc
accaatctttcgcacgatcatttagattatcaccattcgtttgcggcgtaccgcgatgct
aaaaaagcattttttgatcagttatctaaaaatgcttttgcaattaccaatgcagatgat
aaaaatggtgcgttaatgttacaaaacacagcagctaaaaaatttaattacgccattaaa
acgtatgcaaattatcaagcaaaaattttagaaaatcatttttcaggtttgttgttacga
atcgacaatcacgaagtttggtctaaactggtaggtaattttaatgcatataatttatta
gctatttatgctacggcgataaatttaggtttacctcaagccgaagtcttgcgattaata
agcgaattaaatagcgttacagggcgttttcaatatgttgtttcgccaaatcaaatcaca
gcaattgtagattatgcacatacgccagatgcgctagaaaatgtgttaaaaacaattaaa
gaaattagaacaaagaacgaaaatataattacggtggttggttgcggtggcgaccgtgac
aaaactaaaagaccggaaatggcaaaaattgctgcacaatatagcaataaggtaattttt
acgtcagataatccgcgtaccgaaaatccacaaaccattttagatgaaatggaaaaagga
gtaccggccgaatattttaataaaaccttgagcattttagaccgaaaacaagctattaaa
gccgcgtgtcaaatggcaaatgcaaaagatattattttaattgccggcaaagggcatgaa
acgtatcaagaaattaatggcgtgcgccatgattttgatgattttaaaattgtaactgaa
tttttatttgtaaaccaataa
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