Faecalibacterium wellingii: MTP37_06760
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Entry
MTP37_06760 CDS
T10369
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
fah Faecalibacterium wellingii
Pathway
fah03030
DNA replication
fah03410
Base excision repair
fah03420
Nucleotide excision repair
fah03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MTP37_06760 (ligA)
03410 Base excision repair
MTP37_06760 (ligA)
03420 Nucleotide excision repair
MTP37_06760 (ligA)
03430 Mismatch repair
MTP37_06760 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fah03032
]
MTP37_06760 (ligA)
03400 DNA repair and recombination proteins [BR:
fah03400
]
MTP37_06760 (ligA)
Enzymes [BR:
fah01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
MTP37_06760 (ligA)
DNA replication proteins [BR:
fah03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MTP37_06760 (ligA)
DNA repair and recombination proteins [BR:
fah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
MTP37_06760 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MTP37_06760 (ligA)
MMR (mismatch excision repair)
DNA ligase
MTP37_06760 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MTP37_06760 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
PTCB-BRCT
Nlig-Ia
RNA_ligase
Zn_ribbon_NUD
BRCT_2
RUBY_RBDX
HHH
Motif
Other DBs
NCBI-ProteinID:
UQK55365
LinkDB
All DBs
Position
1400433..1402433
Genome browser
AA seq
666 aa
AA seq
DB search
MDFLELEQAKQRVEELRTIIEKNNRLYYDQDAPELEDFEYDALTRELKALEAQFPQLVTA
SSPTQKVGGTASSKLPKVTHTVKMESLLDAFSYDELRDFDRRVREAGAEPEYVVEIKIDG
LSCSLEYENGELVRASTRGDGVVGEDVTANVRAIRSIPKKLKNAPEFLEVRGEVYMPHGA
FQKLCAEQELQGAAPFKNPRNAAAGSLRQKDAKITGSRGLSIFIFNVQQIRGKTLTKHSE
SLDYLKSLGLPVSPRYHVVHDIEQAIAEIEQIGQNRAKLDFDMDGAVIKVNSFAQRDLMG
STNKFPRWAIAFKYPPEVKETTLRSIEVAVGRTGVLTPTACFDPVFLAGTTVARATLHNE
DFIHQFGLCIGDTIQVRKAGDIIPEVIGVTRHAEDAQPYEMPTVCPSCGAPVVHLEDEAA
LRCVNPECPAQALRNIIHFASRDAMDIEGLGTAVATQLVEKNMVHSAADIYTLTREQLLT
LDKFKEKSAENLLSAIERSKQNNLDKLLFGFGIRNIGDKAAALLAEHFGTLQALREATVE
KISEIDGFGGVMAQSVVEFFAKEGTTDLVHRLADAGLNMQWKGEPKGDKLAGKTLVVTGT
LESLSRNEAEALIVKNGGKASGSVSKKTAYVVAGAAAGSKLTKAQTLGIPVLTEAEFLAM
LRDENT
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
gtggatttcttggagttggaacaggcaaagcaacgcgtggaagagctgcgaacgatcatt
gaaaaaaataatcgtctttattatgatcaggatgcgccggaactggaagattttgagtat
gatgccctgacccgggagctgaaagcgctggaagcacaatttccacagctggtaacggcg
tcgtctcctacgcagaaggtgggcggtaccgccagcagcaaactgcccaaggtgacccac
acggtcaaaatggagagccttctggatgctttttcgtatgatgaactgcgcgactttgac
cgccgtgtgcgcgaagcaggcgcagagccggagtatgtggtcgagatcaagatcgatggt
ctttcctgcagcttggaatatgagaatggtgagctggttcgtgcctccacccgcggcgat
ggcgtagtaggcgaagacgttacagccaatgtccgtgccatccgcagcattcccaaaaaa
ttgaagaatgcaccagagtttctggaagtgcgcggtgaagtgtatatgccgcacggagcg
ttccagaagctctgcgcagagcaggagctgcagggcgctgcgcctttcaaaaatccgcgc
aatgctgctgccggttccctgcgtcagaaggatgccaaaataaccggcagccgggggctt
tctatttttatttttaatgtgcagcagatccgcggtaaaaccctcacaaagcattcggaa
agtctggactatctcaagagtctggggttgccggtgtcgccgcgttatcatgtggtgcat
gatattgagcaggccattgcagagatcgagcagatcgggcagaaccgtgcaaagctggac
tttgatatggatggtgctgttataaaagtgaacagctttgcacaacgtgatttgatgggc
tccaccaacaaattcccgcgctgggcgatcgctttcaagtatccgccggaggtcaaggaa
actacgctgcgcagcattgaggtcgcagtgggccgcaccggtgtgctgacgccgactgcc
tgctttgatcccgtatttctggcaggtaccacggttgcccgcgcaacgctgcacaatgaa
gattttatccatcagtttggtctttgcatcggcgataccattcaggtgcgcaaggctggc
gatatcatcccggaagtgatcggtgtcacccgccatgcagaggatgcgcagccctacgaa
atgccaactgtctgtccttcctgcggcgcaccggtcgttcatctggaagatgaagcggct
ctgcgctgtgtgaaccccgaatgtccggcacaggctctgcgcaatatcatccactttgca
tcccgggatgctatggatattgagggccttggtacggctgttgccactcagctggtggaa
aagaatatggtgcattctgctgcggatatctacaccctgacccgggaacagcttttgacg
ctggacaaattcaaggagaaaagtgcggagaatcttttgagcgcgattgaacgctccaag
cagaataatctggataagcttttgttcggttttggcatccgcaacattggtgacaaggca
gcagctctgctggcggagcattttggaacattgcaggccctccgggaagccaccgtggag
aagatcagcgagatcgacggatttggcggcgtgatggcacaaagcgtagtagaatttttt
gcaaaagaaggcaccaccgatcttgtgcaccgcttggcagatgccggcttgaacatgcag
tggaagggcgaaccgaaaggcgataagctggcaggaaaaacgctggtggtcacgggtacg
ctggaatcgctttcccgcaacgaagccgaggctctgatcgtgaaaaatggcggcaaggcc
agcggctccgtctccaaaaagacggcttacgttgtggcgggtgctgcggcgggttccaag
ctgacgaaggcacagacactcgggatccccgttctgaccgaggcagaatttctggcaatg
cttcgggatgaaaatacctga
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