Flavobacterium album: HYN59_14205
Help
Entry
HYN59_14205 CDS
T06577
Name
(GenBank) DNA ligase (NAD(+)) LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
falb
Flavobacterium album
Pathway
falb03030
DNA replication
falb03410
Base excision repair
falb03420
Nucleotide excision repair
falb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
falb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HYN59_14205
03410 Base excision repair
HYN59_14205
03420 Nucleotide excision repair
HYN59_14205
03430 Mismatch repair
HYN59_14205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
falb03032
]
HYN59_14205
03400 DNA repair and recombination proteins [BR:
falb03400
]
HYN59_14205
Enzymes [BR:
falb01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
HYN59_14205
DNA replication proteins [BR:
falb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HYN59_14205
DNA repair and recombination proteins [BR:
falb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
HYN59_14205
NER (nucleotide excision repair)
GGR (global genome repair) factors
HYN59_14205
MMR (mismatch excision repair)
DNA ligase
HYN59_14205
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HYN59_14205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
Nlig-Ia
BRCT_2
PTCB-BRCT
HNOB
DUF223
MazE_antitoxin
Motif
Other DBs
NCBI-ProteinID:
AWH86190
UniProt:
A0A2S1R0K8
LinkDB
All DBs
Position
3120515..3122512
Genome browser
AA seq
665 aa
AA seq
DB search
MNIEQQINALREELNQHNHNYYVLDAPTISDFEFDIKLKELQDLEAKHPEYYDADSPTLR
VGGAVTKNFNTIAHEYRMYSLDNSYSKEELLEWEKRVHRGLGTDNVQYTCELKYDGASIS
ITYENGKLSRAVTRGDGFQGDEVTTNIKTIRAVPLKLKGDYPEKFEIRGEIILPLEGFAK
MNQDILANGGTAYANPRNTASGSLKLQDSAEVAKRPLDCLLYSLIGNNLPVATQFEGLDK
ARHWGFKVPKEARLAKNMEEVMQFIGHWDIHRHELPYETDGVVIKVNDIHQQEELGYTSK
SPRWAIAYKFKAERVSTRLNSITYQVGRTGAITPVANLEPVQLGGTTVKRASLHNADQIE
KLDIREGDEVFVEKGGEIIPKIIAVDFTKRPEDSKPTIYIEKCPECFTELERKEGEAQHY
CPNYYGCPPQIIGRIQHYISRKAMDIEGLGGETVALLYNSDLVHNYADLYELKKEQVVPL
ERMADKSAENLINGIAASKQIPFERVLYALGIRYVGETVAKKLAKHYKNIDNLANASLMD
LVLVDEIGERIAQSVIEFFENEENRKLVERLKSYGVQLETTAADTSVSDMLAGKIFVVSG
VFAKFSRDELKKAIEDNGGKVGSSISSKTDYVIAGDNMGPAKLEKANQLGVKIISEDEFI
SLVSS
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcgaacagcagataaacgcccttcgggaagaactcaaccagcacaaccataat
tactacgtacttgatgccccgaccatatccgactttgagtttgacatcaaactcaaagaa
cttcaggatctggaggcaaagcatcctgaatattatgatgccgactctcctaccctgcgt
gtgggcggtgcggttaccaaaaacttcaatacgatagcacacgaataccgcatgtattca
ctggacaacagctattccaaagaggagctgctggaatgggaaaaacgtgtgcaccggggc
ttaggaaccgataatgtgcagtacacctgcgagctgaaatacgacggcgcttccataagc
attacttatgaaaacgggaaactaagtcgggcagtaacacgtggcgacggttttcagggc
gatgaagtgactaccaatataaagaccatacgcgctgttccgcttaagctaaaaggcgac
taccctgaaaaattcgagattcgcggggagatcatcctcccgcttgaagggtttgccaaa
atgaaccaggacatcctggctaatggcggtacggcctacgccaatccgcgtaataccgca
tcgggctccctaaagctgcaggatagcgctgaagtggccaaacgcccgctggattgttta
ttgtattctcttattggcaataaccttcctgtcgctacgcagtttgaaggccttgacaaa
gcgcgccattggggctttaaagtccctaaggaagcacgccttgccaaaaatatggaagaa
gtgatgcaattcataggccattgggacatacaccgccatgaactgccgtatgaaaccgat
ggtgtggtaataaaagtgaacgatatccaccagcaggaggaactgggctatacctccaag
tcgccacgctgggctattgcatacaagtttaaggcggaacgcgtttctaccaggctaaat
tcaattacctaccaggtgggccgtaccggtgcgataaccccggttgcgaatctggaacct
gtacagcttggcggtacgaccgtaaaacgtgcgtcactccacaacgccgaccagattgaa
aagctggacatccgtgaaggcgatgaagtatttgtagaaaaaggcggcgagatcatccct
aaaatcattgcggttgattttacaaaaaggccggaagattcaaaaccaactatttatatt
gaaaaatgcccggagtgctttacggaactggaacgcaaagaaggcgaagcacagcactac
tgccctaactactatggctgccctccgcagataatcgggcgcatacagcattatatttcg
cgaaaggcgatggatatcgagggccttggcggcgaaaccgtggcgttgctatataattca
gacctggtgcacaattatgccgacctctatgaactgaaaaaagaacaagttgtcccactg
gagcgcatggcagataagtcggcggagaaccttatcaatggtattgccgcatcgaagcaa
atcccgttcgagcgcgtgctgtatgcccttgggatacgttacgtgggcgaaaccgttgcc
aaaaaactggcaaaacactacaaaaacattgacaatctggcgaatgcctcgttaatggat
ttggttttggttgatgagatcggagaacgcattgcgcaaagtgttattgagttttttgaa
aatgaagagaaccgcaagcttgtagaacgcctgaaaagctatggtgtacaactggaaacc
actgctgccgatacaagcgtaagcgacatgcttgccggcaaaatatttgtggtatcgggt
gtttttgccaaattctcacgcgatgaactgaaaaaagcgatagaagataatggcggcaaa
gttggcagctctatatcatctaaaaccgactatgtgattgccggtgacaatatgggccct
gcgaaattggaaaaagcaaatcagctgggtgtaaagatcattagtgaggatgagtttatt
tctttagtaagttcctga
DBGET
integrated database retrieval system
