Ferriphaselus amnicola: OYT1_ch1108 Help Entry OYT1_ch1108       CDS       T05631                                  Name (GenBank) DNA ligase   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism fam  Ferriphaselus amnicola Pathway fam03030   DNA replication fam03410   Base excision repair fam03420   Nucleotide excision repair fam03430   Mismatch repair Brite KEGG Orthology (KO) [BR:fam00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     OYT1_ch1108    03410 Base excision repair     OYT1_ch1108    03420 Nucleotide excision repair     OYT1_ch1108    03430 Mismatch repair     OYT1_ch1108  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:fam03032]     OYT1_ch1108    03400 DNA repair and recombination proteins [BR:fam03400]     OYT1_ch1108 Enzymes [BR:fam01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      OYT1_ch1108 DNA replication proteins [BR:fam03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      OYT1_ch1108 DNA repair and recombination proteins [BR:fam03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      OYT1_ch1108    NER (nucleotide excision repair)     GGR (global genome repair) factors      OYT1_ch1108    MMR (mismatch excision repair)     DNA ligase      OYT1_ch1108   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       OYT1_ch1108 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 DNA_ligase_ZBD Nlig-Ia PTCB-BRCT HHH HHH_3 DUF1192 BRCT_2 fvmX6 Zn_Ribbon_TF Motif Other DBs NCBI-ProteinID:  BBE50668 UniProt:  A0A2Z6GAZ9 LinkDB All DBs Position 1126321..1128369 Genome browser AA seq 682 aa AA seqDB search MTDIAARIAQLRAEIERHSHQYYALDAPLIPDAEYDRLFRELQALEADHPEFASLDSPTQ RVGGKLLDGFAPVLHAVPMLSIRTETDISDGGALAFDGRVKRELEQPDAEIEYVCELKFD GLAINLRYEHGVLVQAATRGDGESGEDVTQNIRTIRQIPLRLQGSAPPVLEVRGEAYMAR RDFERYNEKQRELGLPTLVNPRNGAAGSIRQLDPALAARRPLSFFAYGLGEVQGWELPAT HSGILEALATLGVPVCEERAVVRGASGLVAFHQRVAEKRDALPFDIDGVVYKVNNLTLQA RLGFVTREPRWAVAHKFPAEEQLTVVRDIDIQVGRTGKLTPVAKLEPVFVGGTTVSNATL HNEDETRRKDVRIGDTVIVRRAGDVIPEVVGVVLDQRPADVGVPFDLFQRLDGKCPVCGS HIVREEGEADWRCSGGLFCPAQRKQALLHFAGRRAMDIEGLGDKLVEQLVDGDFVRTPAD LFTLNLTILAQLERMGEKSANNLLDAIERSKQTTLARFIYALGIRNVGEATAKDLARHFG GLDGVLQANIEALQQVPDIGPIVAQSIVAFFGEPHNLGVVQALRDNGVSWPEQVVIQQTT PLQGLTFVLTGTLATMSRDEAKERLEKLGARVSGSVSKKTSHVVAGTEAGGKLDKAQELG INIMNESQFIDFLRKIENQDET NT seq 2049 nt NT seq  +upstreamnt  +downstreamnt atgaccgacatcgctgcgcgcatcgcgcaactgcgcgctgagatcgaaagacacagccac cagtattacgcgctggacgcgccactcatccccgatgccgaatatgaccgcctgttccgc gagttacaggcacttgaagccgatcatcccgagttcgcctctctagattcccccacccaa cgcgtcggcggcaagctgctcgatggcttcgcgccggtgctccatgccgtgcccatgctg tccatccgtaccgagaccgacatcagcgacggcggcgcgctggccttcgatggccgcgtc aagcgcgagctggaacagccggacgctgagatcgaatacgtctgcgaactgaagttcgat ggcctcgccatcaacctgcgctacgagcacggcgtgttggtgcaggcggctacgcgcggc gatggcgagagcggcgaagacgtgacccagaacatccgcaccattcgccagattcctttg cgcttgcaaggcagcgcgccacccgtgcttgaagtccgcggcgaggcttacatggcgcgg cgcgacttcgagcgttacaacgaaaagcaacgcgaactgggcttgcccacgctggtgaac ccgcgcaacggtgcagccggcagcatccgtcagctcgacccagcattggcggcgcgccgc ccgttgtcgttcttcgcctacggtttgggcgaagttcagggctgggaactgcccgccacc cacagcggaatcttggaggcattagcgactttgggcgtgccggtgtgcgaagagcgtgcc gtggtgcgcggcgcttcaggcttggtggctttccatcagcgcgttgccgaaaagcgtgat gcgctgccgttcgacatcgacggcgtggtctataaagtcaacaacctgacgctgcaagca cggctgggcttcgtcacccgcgaaccgcgctgggcggtggcgcacaaatttccggcggag gaacagcttaccgtggtgcgtgacatcgacatccaggtcgggcgcaccggcaaactcacg ccggtagccaagctggagccggtgttcgtcggcggcactacggtttccaacgccaccttg cacaatgaggacgagacgcggcgcaaagacgtgcgcatcggcgacacggtgatcgtgcgc cgtgccggcgacgtgatcccagaagtagtgggcgtggtgttggatcagcgtcccgccgat gtcggtgtgccgttcgatctgtttcagcgcctagatggaaaatgcccggtgtgcggcagc catatcgtgcgcgaggaaggcgaggccgactggcgttgttccggtggcttgttctgccca gcacagcgcaagcaggccttgctgcatttcgccggtcgtcgcgcgatggacatcgaaggt ctgggcgataagctggtggagcagttggtggacggcgacttcgtgcgcacaccggcggat ctttttacgctgaacctgaccatactcgcgcaactggagcgcatgggtgagaagtcggcc aacaatctgctcgatgccatcgaacgcagcaagcaaacgacgctggcacgtttcatctac gcactcggtatccgtaatgttggagaggcgacggcgaaggatctggcgcgccatttcggt gggctggatggcgtgctgcaagccaatatcgaagccttgcaacaggtaccggatattggc cccatcgtcgcgcagagtattgtggctttcttcggcgaaccgcataatctgggcgtggtt caggccctacgcgataacggggtgagttggccagagcaggtggtgattcagcagactacg cccttgcaaggcttgaccttcgtgttgaccggtacgctcgcgacgatgtcccgagatgag gcaaaagaacgattagagaagctgggggcgcgcgtcagcgggagcgtgtcgaaaaagacc agccatgtggttgcaggtacggaggcgggaggaaagttggacaaagcgcaagagctcggg ataaacatcatgaacgagtcgcagtttattgacttccttaggaaaatcgagaatcaagat gaaacataa

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