Flavobacterium ammonificans: SHINM13_11210
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Entry
SHINM13_11210 CDS
T08737
Name
(GenBank) hemolysin D
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
fao
Flavobacterium ammonificans
Pathway
fao01501
beta-Lactam resistance
fao01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
fao00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SHINM13_11210
01503 Cationic antimicrobial peptide (CAMP) resistance
SHINM13_11210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fao03036
]
SHINM13_11210
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fao02000
]
SHINM13_11210
01504 Antimicrobial resistance genes [BR:
fao01504
]
SHINM13_11210
Chromosome and associated proteins [BR:
fao03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
SHINM13_11210
Transporters [BR:
fao02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
SHINM13_11210
Antimicrobial resistance genes [BR:
fao01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SHINM13_11210
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSH_RND
RND-MFP_C
Beta-barrel_RND
BSH_CzcB
YknX_C
BSH_CusB
Biotin_lipoyl
HH_MFP_RND
BSH_LcnD
DUF6384
HH_EMRA
BSH_YhbJ
Beta-barrel_RND_2
BSH_YknX
HH_AprE
Motif
Other DBs
NCBI-ProteinID:
BDB56825
LinkDB
All DBs
Position
complement(1325891..1327006)
Genome browser
AA seq
371 aa
AA seq
DB search
MKKITMCVSLTLLLGLTVACNSNKNEKIGFEKYPTTKPILVDTTITNEYVADIQSIQNVE
IRTKINGFIEKIHVDEGKPVKAGQLLFTINSQTFQKDLLKAKAMVKNAIAEAKNAELDLQ
NVKLLAGKNVVSKTELEKAQANYSAALARVEEHKANQESAEIHLAMTKIRAPFNGIINRI
PFKIGSLINEGTLLTTISNNNQVYAYFNVSEKEYLQIKEQRSEKSHDDITLLLANNKPHD
YKGTIETIEGEFDQNTGNIAFRAKFPNPNLLLKHGSSGKIQLTNSIQNALIIPQKATFEI
QDKQYVFVIDKKNVVRSRAIEVQQRLQHLYIIKNGLSVEDQVLYEGIQNLKEGDTISPQV
IAMKALMSKLK
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaattactatgtgtgttagtctgactttattgttaggcctaacagttgcttgc
aattctaataaaaacgaaaaaattggttttgaaaaatatcccacaacaaaaccaatactt
gtagatactaccataacgaatgaatatgtagctgatattcaatccattcaaaatgtggaa
attagaacaaaaattaatggctttatcgaaaaaattcatgttgatgaaggaaaaccggta
aaagcaggtcagctcttgtttacaatcaatagccaaacttttcaaaaagatcttttgaaa
gcaaaggctatggtaaaaaatgctattgcggaggcaaaaaacgcagagttggatttacag
aatgtgaaattattagctggtaaaaatgtagtctcaaaaacagaattggaaaaagctcag
gccaactattctgctgctctagcccgtgtagaagaacacaaagccaatcaagagtcggcc
gaaattcatttggcaatgactaaaatacgcgctccgttcaatggaataatcaatagaatt
ccgttcaaaattggaagtttaattaatgaaggcacattgctaaccaccatttcaaacaac
aatcaggtttatgcctatttcaatgtatcggaaaaagaatatttgcagattaaagaacag
cgaagcgagaaatctcatgatgatattacgctccttttggcaaacaataaacctcacgat
tacaaaggaactattgaaaccatagaaggcgaatttgatcaaaacaccggaaatatagcc
tttagagccaaattcccaaatccgaatttattattaaaacacggatcgagtgggaaaata
caattgaccaactcaatacaaaatgcgttgataattcctcaaaaagcaaccttcgaaatt
caagacaaacaatatgtttttgtaattgacaaaaaaaatgttgttcgttcaagagcaatc
gaagttcagcaacgattacaacatctgtacatcatcaaaaacggactttcagtagaagat
caagtactctatgaaggaatccaaaaccttaaagaaggggatacaattagcccacaagtt
attgctatgaaagcactaatgtctaaactgaaataa
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