Flavobacterium ammonificans: SHINM13_16380
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Entry
SHINM13_16380 CDS
T08737
Name
(GenBank) MexH family multidrug efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
fao
Flavobacterium ammonificans
Pathway
fao01501
beta-Lactam resistance
fao01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
fao00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SHINM13_16380
01503 Cationic antimicrobial peptide (CAMP) resistance
SHINM13_16380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fao03036
]
SHINM13_16380
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fao02000
]
SHINM13_16380
01504 Antimicrobial resistance genes [BR:
fao01504
]
SHINM13_16380
Chromosome and associated proteins [BR:
fao03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
SHINM13_16380
Transporters [BR:
fao02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
SHINM13_16380
Antimicrobial resistance genes [BR:
fao01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SHINM13_16380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
BSH_RND
YknX_C
RND-MFP_C
BSH_CzcB
BSH_CusB
CzcB_C
Beta-barrel_RND
Biotin_lipoyl
HH_MFP_RND
HH_EMRA
BSH_YhbJ
BSH_LcnD
SHOCT
HH_AAEA_pHBA
FeoB_associated
Motif
Other DBs
NCBI-ProteinID:
BDB57342
LinkDB
All DBs
Position
complement(1890094..1891167)
Genome browser
AA seq
357 aa
AA seq
DB search
MTQDLNMKIKTLVYSLLIIGLVGLIGYRITKNSSNGGPKDKGKEEKPITVSGYVVNLQTF
DNNLALSGSIEADEQVEIRSEVSGIVTAIYFQEGSNVSKGQLLFKVNDIELRAQLAQAKT
KESLSAENERRAKLLLQKEAISQEEYEVARADYKTTQAQSQLIQAQIEKTSVRAPFSGKI
GLRSISPGTYVTPSLLVAKLVNSGQLKITFSIPEKYASQVKKNATISFKVSGSDQSYSAK
VYAIEPEVEIATRTLQVRALASNKDGKLFPGTFADVELPLDIIKDAVVIPTEAIIPVQNG
KKVFIANKGMAKEVLVETATRTDASILILSGLKAGDTVLTSGVMSLKDESPIVVKIK
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
ttgacacaagatttaaatatgaaaataaaaactctcgtttattccctattaattatcggt
ttagtaggattgattggttacagaattacaaagaacagttctaatggcggtccaaaagac
aaaggtaaagaagaaaaacctataactgtcagtggctatgtagttaacttgcaaacattt
gacaataatttagcgttatcaggatcaattgaagccgatgaacaagtggagattcgctct
gaagtttcaggaattgtaactgctatttattttcaagaaggaagtaatgtgagcaaggga
caactactattcaaagtcaatgatattgaacttagagcgcaattggcgcaagctaaaacc
aaagaaagtttgtctgccgaaaacgaaagaagagctaaattattactccaaaaagaagct
attagtcaggaagaatatgaagtggctcgtgccgattacaaaactactcaagcgcaaagc
caactgattcaagcccaaatagaaaaaacttcggtgcgtgctcctttttcaggaaagatt
ggattgcgttctatttctcctggaacctacgttactccttctcttttagtagctaagttg
gtgaatagtggtcaattaaaaattactttttctattccagaaaaatatgcttctcaagtt
aaaaagaacgctactatatcatttaaagtatctggatcagatcaatcgtattcagccaaa
gtgtatgctattgagccagaagtcgaaattgcaacaagaacccttcaagttcgcgcatta
gcaagtaataaagatggtaaattatttccaggaacttttgcagatgtggaacttccttta
gacataattaaagacgccgtagttattcctaccgaagcaattattcctgttcaaaacgga
aaaaaagtatttattgctaataaaggaatggcaaaagaagtacttgttgaaacagctacg
agaacagatgcctcaatacttatattatcaggtttaaaagcaggagatactgtattaact
tcaggagtgatgtcattaaaagacgaatctcctatcgtagtaaagattaaataa
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integrated database retrieval system
