Flavobacterium ammonificans: SHINM13_17980
Help
Entry
SHINM13_17980 CDS
T08737
Symbol
ddpX
Name
(GenBank) D-alanyl-D-alanine dipeptidase
KO
K08641
zinc D-Ala-D-Ala dipeptidase [EC:
3.4.13.22
]
Organism
fao
Flavobacterium ammonificans
Pathway
fao01502
Vancomycin resistance
fao02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
fao00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SHINM13_17980 (ddpX)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
SHINM13_17980 (ddpX)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
fao01002
]
SHINM13_17980 (ddpX)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fao01011
]
SHINM13_17980 (ddpX)
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
fao01504
]
SHINM13_17980 (ddpX)
Enzymes [BR:
fao01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.13 Dipeptidases
3.4.13.22 D-Ala-D-Ala dipeptidase
SHINM13_17980 (ddpX)
Peptidases and inhibitors [BR:
fao01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
SHINM13_17980 (ddpX)
Peptidoglycan biosynthesis and degradation proteins [BR:
fao01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
SHINM13_17980 (ddpX)
Antimicrobial resistance genes [BR:
fao01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
SHINM13_17980 (ddpX)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M15
VanY
zf-C2H2_6
Motif
Other DBs
NCBI-ProteinID:
BDB57502
LinkDB
All DBs
Position
complement(2066922..2067551)
Genome browser
AA seq
209 aa
AA seq
DB search
MRTLWSLFFLFFFSTINTIHAQTDETIADSSFVNLKDYSADFVYDMKYATADNFLKAKVY
DCPECLLRFKTVKALVKANEKFMKKGYRIKIYDCYRPLDIQKKMWQIIPNPEYVANPAKG
SIHNRGGAVDITLVDSTGAELDMGTSFDFFGPEASHFYENLPDEVKQNRLLLKKIMRKSN
FISFDSEWWHYNVKNASKEKVSNAKWNCD
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgcgaactctttggtccttattttttttgttttttttctcaacaataaacaccattcat
gcccagactgatgaaacgattgcagattcttcttttgtgaatctgaaagactatagtgct
gattttgtttacgatatgaagtatgcaacggcggataattttttgaaagcaaaagtctat
gattgtccagaatgtcttttacgttttaaaacagtaaaagctttagtaaaagccaacgag
aaattcatgaaaaaagggtatcgtataaagatttatgactgttatcgtccattagatatt
caaaaaaaaatgtggcaaattatacccaatccagaatatgtcgcaaatcctgcaaaaggt
tcgattcacaatagaggaggagcagttgatattactttagtcgatagtactggagcagaa
ttagacatgggaacatcatttgatttttttggtccagaagcgagtcatttctatgagaat
cttccagatgaagtaaaacagaatcgattgcttctgaaaaaaataatgagaaaaagtaat
tttatttcttttgattctgagtggtggcattataatgtaaaaaatgcttccaaggagaag
gtttctaatgctaaatggaattgtgattaa
DBGET
integrated database retrieval system
