Rhodobacteraceae bacterium SC52: G5B39_12850
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Entry
G5B39_12850 CDS
T06457
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
faq
Rhodobacteraceae bacterium SC52
Pathway
faq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
faq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
G5B39_12850 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
faq03400
]
G5B39_12850 (nth)
Enzymes [BR:
faq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
G5B39_12850 (nth)
DNA repair and recombination proteins [BR:
faq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
G5B39_12850 (nth)
Prokaryotic type
G5B39_12850 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Transposase_20
Motif
Other DBs
NCBI-ProteinID:
QIE42966
UniProt:
A0A6G6F9H7
LinkDB
All DBs
Position
complement(2606750..2607409)
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AA seq
219 aa
AA seq
DB search
MSPQADYATVRAAFERFADHEPEPKGELEHVNAYTLVVAVALSAQATDVGVNKATRALFA
IADTPQKMLDLGEEGVIEHIKTIGLYRNKAKNVIKLSQILVDQFGGQVPSSRAALQSLPG
VGRKTANVVLSMWWGHPAQAVDTHIFRVGNRTGLCPGRDVDAVERAIEDQVPVEFQRHAH
HWLILHGRYICKARKPVCGVCIIRDLCAFPDKTDSGKAA
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccgcaagccgattacgccaccgtgcgcgcggcattcgaacgctttgcagaccac
gaaccggaacccaagggcgagttggaacatgtcaacgcttacacacttgtggttgcagtc
gcgctgtcggcgcaggcaacagatgtgggcgtgaacaaggccacgcgcgcgctctttgcc
atcgctgacacgccacaaaagatgctggatctgggcgaggaaggcgtcattgagcatatc
aaaaccattggcctgtatcgcaacaaggcgaagaacgtgatcaaactaagccagatcttg
gtagatcagttcggcggtcaggtgccctcgtcgcgcgcagcgttgcaatcgctgccgggg
gttggtcgcaagacggcgaatgtggttctgtccatgtggtgggggcatccggcacaggcg
gtggacacccatatctttcgggtgggcaaccgcaccggcctgtgtccggggcgcgatgtg
gatgccgtggaacgcgcgatcgaagatcaggtcccggtggaatttcagcgccacgcccat
cactggctgatcctgcacgggcggtacatctgcaaggcccgcaagccggtttgcggggtc
tgcatcattcgcgacctgtgtgcgtttccggacaagaccgacagcggcaaagcggcttga
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