Fopius arisanus: 105263871
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Entry
105263871 CDS
T07645
Name
(RefSeq) DNA ligase 4-like isoform X1
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
fas
Fopius arisanus
Pathway
fas03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
fas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
105263871
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fas03400
]
105263871
Enzymes [BR:
fas01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
105263871
DNA repair and recombination proteins [BR:
fas03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
105263871
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
BRCT
BRCT_2
RNA_ligase
Methyltransf_PK
DNA_ligase_IV
Motif
Other DBs
NCBI-GeneID:
105263871
NCBI-ProteinID:
XP_011298656
UniProt:
A0A9R1SWZ4
LinkDB
All DBs
Position
Unknown
AA seq
903 aa
AA seq
DB search
MTTIDSQISFSTLCSVFEEISVAKATKKHQILSEFLQKCRGECQPSTTPSLFPILRLFLL
KLDRERGPNGLKETSLAALYIRVFSLGRASPDGKKLLNYKEPLRAKNHTSDFAERVFVVL
GPRLRKSSTLLVKDINHFLDTISNQFSSNQKQDGEFIKMISECSPQEIKWLTRIVLKELK
LSMGSKKILQVFHPDAEQLFAQNSNIKIVCETLANPKVRINTKISRINVFSPFKPMLLER
LPITQIRKFFIDGRRTEFIIQTKFDGERSQVHMRDRKFKYFTRHGLEITRNPSYGESRGT
GGFLTNKISSLLNPNCRSIILDGEMMGFHKEKREFSSKGVPFDVKKLTSKSKHQPCLVAY
DILLYNDELLINKPLEYRLKILNSAFEESPGVLLRAKNERVTSMDDIITAFNKSIDNHEE
GIVLKKIDSLYQIDTRNGSGCYKIKSDYSSELIHDVDLVIIGGYYGEGRYSGLFNSFLTA
CVQPTPSKKFYSVVSVSNGLTTHAIQSFNAKFKPFWTNTKPEVIVGPRKSPPDVWIHPQH
SVVLEIRASEMSESSNYPGGWTLRFPRVEKIRDDKPFDDCCTLAELRGLKNRRGFIQKLT
KRHATTEDIYEAPLKFKKSRHTISEIKVDDCYLGISASDVVRASRVFMGKEFCVINGETM
KERAGEGNTGKGMTKREIERLVMEHSGKIVQNPTKETFCVIAGDSQGIKVRNIVDSRKYD
VVRVSWVMRAVEDENLGGVVEFFPWELIGMKMETFVRLRERFDEYYDDYFEDADEETFKR
STDRVSLLKDNQMVLTKRKVQELEREIFQGNSSFNIFRGLVGVFIDGKDVRAFEFRFMGG
EVKVEVDQDVTDVFVGEGNVSMIEVYERVNQRARADVRIIKSQWIQECLKEGKAVERKRF
IVT
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaatcgattctcaaatttcgttctcgactctctgctcggtttttgaggagatc
tcagtggcaaaagccacgaaaaaacatcagattctttcagaattcctccagaaatgtcga
ggcgaatgccaaccctcgactacaccctctctctttccaattctccgtctgttcctctta
aaactggacagagaacgtgggcccaatggtctcaaagagacatccctcgcagccctttat
attcgagtcttttccctcgggagggcatcccccgatggtaaaaagcttctgaattataaa
gaaccgttgcgagcgaaaaaccacacgagcgattttgcagagcgagtgttcgtcgttctg
ggacctcgtctgagaaaatcatcgacactcctggttaaggatatcaatcacttcctggac
acaatatccaatcaattttcgtcgaatcagaagcaagacggtgagttcattaaaatgatc
tctgaatgttcaccacaagagattaaatggttgacgagaatcgtcctgaaggagctgaag
ctgtcgatgggatcgaagaagattctccaagtgtttcatcctgacgcggagcagctgttc
gcgcagaactcgaatatcaagatcgtctgcgagacactggcgaatcccaaggtgcggatc
aatacgaaaatctccaggataaatgttttctcgccattcaagccgatgttgctggaacga
ttgccgattactcagatcagaaaattcttcattgacgggaggagaactgagttcattatc
cagacgaagttcgacggcgagaggtcccaggtgcatatgagggacaggaagttcaagtac
ttcacaaggcacgggctggagatcaccaggaatccctcctacggagaatcaagaggtact
gggggatttctgacgaataaaatctcttcattactgaatccaaattgcagatctatcatc
ctagacggtgaaatgatgggatttcacaaagaaaagagagaattcagcagtaaaggagtt
cccttcgacgtcaagaaattgacatccaagagtaaacatcagccttgtctcgtcgcctac
gatattctcctctataacgacgaattgctgatcaacaaaccactggagtatcgattaaaa
atattgaatagcgcgtttgaagagtccccaggagttttgctgagagctaaaaacgagcga
gttacatcaatggatgacataatcacagcattcaacaagtctatagataaccacgaagaa
ggcatcgtcctgaagaagatcgacagtctgtaccagatagacacgcgcaacggcagtggc
tgctacaaaataaaatccgattactcctcggaattgatccacgacgtggacctcgtgata
atcggtggttactacggcgagggtcgatactctggcctcttcaacagtttcctcacagcc
tgcgttcaaccgactccatccaaaaaattttactcagtcgtctccgtcagcaatggcctc
acgacccacgcaattcaatccttcaatgcaaaattcaagccattctggacgaacaccaaa
ccagaggtgattgtcgggccgaggaagagtcccccagacgtctggattcatccccagcac
tcagttgtccttgaaatacgagcatcagagatgtccgagtcgagtaattatcccggtggc
tggaccctgcggttccccagagtcgagaaaatcagggatgataagcccttcgacgactgc
tgcaccctggccgaactaagaggattgaaaaatcggcggggattcatccagaagctgacg
aagaggcacgcaaccaccgaagacatttacgaggcaccacttaaatttaaaaaatcgagg
cacacgatatctgagattaaagttgatgattgctacctggggatcagtgcctcggacgtt
gtcagggctagtagagtcttcatggggaaggagttttgcgtgattaatggggaaacaatg
aaggaaagggccggtgagggaaatacgggaaaaggaatgaccaagagggagattgagagg
ctcgtgatggagcactcgggaaaaatcgttcagaatcccacgaaggagacgttctgcgtc
atcgctggggattcccaagggatcaaagtgaggaatatcgttgatagcaggaagtacgat
gttgtgagggtctcctgggtgatgagggccgttgaggatgagaatttaggaggagtcgtt
gagtttttcccatgggagctcattggaatgaagatggagacgtttgtcaggctcagggag
aggttcgatgagtattatgatgattactttgaagatgctgatgaggagacttttaagagg
tccactgatagggtatcactgctgaaggataatcagatggttttgaccaagaggaaggtt
caagagttggagagggaaatattccaggggaattccagttttaatatattccggggactc
gtgggggtcttcatagatggaaaagacgtgagggcttttgaatttaggtttatggggggt
gaggtcaaggtggaagtcgatcaggatgtcactgacgtttttgttggcgaggggaatgtc
tccatgattgaagtttatgagagagttaatcagagggcgagggctgatgtgaggattata
aaaagtcagtggattcaggagtgcctcaaggagggcaaggccgtcgagaggaagaggttt
attgtcacatga
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