Fulvitalea axinellae: FUAX_25190
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Entry
FUAX_25190 CDS
T09748
Symbol
ligA
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
fax
Fulvitalea axinellae
Pathway
fax03030
DNA replication
fax03410
Base excision repair
fax03420
Nucleotide excision repair
fax03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FUAX_25190 (ligA)
03410 Base excision repair
FUAX_25190 (ligA)
03420 Nucleotide excision repair
FUAX_25190 (ligA)
03430 Mismatch repair
FUAX_25190 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fax03032
]
FUAX_25190 (ligA)
03400 DNA repair and recombination proteins [BR:
fax03400
]
FUAX_25190 (ligA)
Enzymes [BR:
fax01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
FUAX_25190 (ligA)
DNA replication proteins [BR:
fax03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FUAX_25190 (ligA)
DNA repair and recombination proteins [BR:
fax03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
FUAX_25190 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FUAX_25190 (ligA)
MMR (mismatch excision repair)
DNA ligase
FUAX_25190 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
FUAX_25190 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
Nlig-Ia
PTCB-BRCT
BRCT_2
HHH
HNOB
RNA_pol_A_CTD
Remorin_N
Motif
Other DBs
NCBI-ProteinID:
BDD10087
UniProt:
A0AAU9CXB4
LinkDB
All DBs
Position
3305435..3307450
Genome browser
AA seq
671 aa
AA seq
DB search
MDKEQARNEILELRQKLNYYNEQYYLHENSVVSDREFDSLLEKLIALEKAHPEFDDPNSP
SSRVGGGITKEFPTVTHRYPMLSLGNTYSAEDLADFDQRIRKTLGDEPFEYLCELKFDGV
AMSLRYENGKLSAGVTRGNGTQGDDVTNNVRTIRTVPLSLSGQDFPEDFEVRGEVMLPLK
EFRRINAEREDIGEAQLANPRNAASGTIKMQDSKVVASRNLDCYLYYLLGENLGVGNQAE
ALEKMKEWGFFVSPTYRLCANLDEVMEYIEHWREGRNELGVETDGIVIKINDFKQRERLG
NTSKSPRWAIAYKYETERAYTKLKNVTYQVGRTGAVTPVANLEPVDLAGTVVKRASLYNA
NEIERLGLRKGDTVGVEKGGEIIPKIVDVATENRPDESKSIAFVENCPECDTKLIRKEGE
AVHYCPNETGCPPQIKGKIEHFVQRQAMNIMSLGTRTINALFNKGLANNIADLYELTYDQ
VIELEGFKEKSVNKLLQAIEDSKKKPFETVLFAIGIRFVGKTVAEKLARHFGSIDKIEQA
DFETLIDVPEIGEQIANSVIEFFKNEKSKELIERLKSHGLQFEVVADDSQSPASNQLDGL
SFVVSGVFANFSRDGIKDAVKAHGGKIVSAISSKVDYLLAGEKIGPSKLSKAEKLGTKII
SEEDFAELISD
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggacaaagaacaggcacggaacgagatactggaattacgccaaaagctcaactactat
aacgagcaatattatctccacgaaaactccgtggtaagcgacagagaattcgattcctta
ctcgaaaaactcatcgccctggaaaaagcccacccagagttcgacgacccgaactcgccg
tcgagccgcgtgggcggagggataaccaaagaattccctaccgtaacgcaccgctacccg
atgctatcgctcggcaacacctactcggcagaagacttggccgattttgaccagcggatc
cgcaaaaccctcggcgacgagccgttcgaatatctatgcgaactcaaattcgacggcgtg
gccatgagcctgcgctacgaaaacggtaaactcagcgccggcgtaacacgcggaaacgga
acgcagggcgacgacgtaaccaacaacgtccgcaccatccgcaccgtaccgctcagcctt
tcgggccaagatttccccgaagatttcgaagtacggggcgaggtaatgcttccgctcaaa
gagttccgtcgcatcaacgccgagcgcgaggacatcggcgaagcccaattggcaaacccg
aggaacgccgcttcgggaaccataaaaatgcaggactccaaagtcgtggcttcccgtaac
cttgactgctacctctattatctgttgggagaaaaccttggagtcggaaaccaagccgaa
gccttggaaaagatgaaggaatggggattcttcgtttcgcccacatacaggctttgcgcc
aacctcgacgaggtaatggaatatatagagcattggcgggaagggcgtaacgagttgggc
gtggaaaccgacggaatcgtaatcaagatcaacgatttcaaacaacgcgaacgcctgggc
aacacatccaagagcccgcgctgggcaatcgcctataaatacgaaacggaaagggcttac
accaagctcaaaaacgttacttaccaagtgggtcgcacaggagccgtgactcccgtagcc
aacttggaacccgttgatttggccggaacggtagtgaaaagagcgtcactctacaacgcc
aacgagatcgaacgcctcggtctccgcaaaggcgatacggtaggcgtggaaaaaggcggg
gaaatcatcccaaaaatcgtggacgtggccaccgaaaaccgtccagacgaaagcaaatcc
atcgcttttgtggagaattgccccgaatgcgacaccaaactgatacgcaaagaaggagaa
gcggttcactactgcccgaacgagaccggctgtccgccgcagatcaaaggcaagatagag
cacttcgtacagcgccaggccatgaatatcatgagtctgggcacacgcaccatcaacgcg
ctgttcaacaaaggcttggccaacaacatcgccgacctgtacgaactgacttacgaccaa
gtaatcgaactcgaaggcttcaaggagaaatcggtcaacaaactgctccaagccatcgaa
gactctaaaaagaaacctttcgaaaccgtccttttcgccatcggcatccgcttcgtgggg
aaaaccgtggccgaaaaattggcccgccacttcgggtcgatagacaaaatagagcaagcg
gatttcgaaacgctgatcgacgtgcccgaaatcggggaacagattgccaatagcgtaatc
gagttcttcaaaaacgaaaaaagcaaagagctaatcgagcgactcaagtcgcacggcctt
cagttcgaggtagtggccgacgactcacaaagtccggcgagcaatcaacttgacggttta
tcctttgtagtctccggagtttttgccaacttcagccgcgacggaatcaaagacgccgtg
aaagcccacggaggaaaaatcgtctcggccatttccagcaaagtcgattacctgctggcc
ggagagaaaatcggcccgtcgaaactctccaaggcggaaaagctcggcacgaaaataatc
tccgaagaagatttcgccgaattgatttcggactga
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