Flavivirga abyssicola: Q4Q34_03975
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Entry
Q4Q34_03975 CDS
T09912
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
fay
Flavivirga abyssicola
Pathway
fay01501
beta-Lactam resistance
fay01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
fay00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Q4Q34_03975
01503 Cationic antimicrobial peptide (CAMP) resistance
Q4Q34_03975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fay03036
]
Q4Q34_03975
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fay02000
]
Q4Q34_03975
01504 Antimicrobial resistance genes [BR:
fay01504
]
Q4Q34_03975
Chromosome and associated proteins [BR:
fay03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Q4Q34_03975
Transporters [BR:
fay02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Q4Q34_03975
Antimicrobial resistance genes [BR:
fay01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Q4Q34_03975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YknX_C
Beta-barrel_RND
BSH_RND
RND-MFP_C
BSH_CusB
BSH_CzcB
DUF4354
BSH_YknX
CzcB_C
Motif
Other DBs
NCBI-ProteinID:
WVK14187
LinkDB
All DBs
Position
complement(1015278..1016330)
Genome browser
AA seq
350 aa
AA seq
DB search
MIFFKFLFVLCILFSCKEEKKKTNIKENSALVVNNIPKKVKYNSINFGNFELELKTTGRV
YAKKKVDVKFVLNEKIASINVINGQNIKRGQILASQNNTVYRNKVIKAKEQLERAKIDVE
DILIGFNLSLKDSLKIPKTTLDMAKNRGNYNTSISNLRDANIELASTTLRAPINGVIANL
EAEKYSYPDLTKPFCTIIDDSVFDVEFNVLEENFMFLKKGQALEINNTFSEIKFNGEIIE
INPIVDENGLIKVKGAFKNIGKRILDGMNVNITIKKIIPNKLFVIKKSIVLRDNKKVVFT
VKDGKAIWNYVETSLENSDYIVIERGLKKNDKIIYSGNINLAHNSSIIEE
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgattttctttaaattcctatttgtcttatgtattcttttttcatgtaaggaagaaaaa
aagaaaacaaatattaaagaaaacagtgcattagtagttaataatattcctaaaaaagtt
aaatataattcaataaattttggaaacttcgaactagaattaaaaacgacaggaagggtt
tatgccaaaaaaaaagtagacgtaaaatttgttttaaatgaaaaaatagcttctataaat
gtaatcaacggacaaaatataaaaagaggccagatattggctagccaaaataataccgtt
tatagaaacaaagttattaaagcaaaagagcaattggaaagagcaaagattgatgtagaa
gatatattaataggttttaacctaagtttgaaagattctttaaagattcccaaaactacg
ctagatatggcgaaaaatagagggaattataatacctctatttcaaatttaagagatgca
aatattgaattagcttcaactactttaagagccccaataaatggtgtaattgctaattta
gaagctgagaagtatagctatcctgatttaactaaaccgttttgtacgattatagatgat
tctgtttttgatgtagagtttaacgtattagaagaaaatttcatgtttttaaaaaaagga
caagcactagaaataaataatactttttctgaaattaaattcaatggagaaattatagag
ataaaccctatagtggatgaaaatggattaattaaagttaaaggggcttttaaaaatatt
ggtaaaagaatattagacggtatgaatgtaaatattaccataaaaaaaataatcccaaac
aaattatttgttattaaaaaaagtattgtgttgcgagataataaaaaagtggtatttact
gttaaagatggaaaagctatttggaattatgtagaaacttctttagaaaattctgattac
attgtcatagaaagaggtctgaaaaaaaatgataaaataatatattcgggaaacatcaat
ttggcccataattcttctataatcgaagaataa
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