Flavivirga abyssicola: Q4Q34_17580
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Entry
Q4Q34_17580 CDS
T09912
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
fay
Flavivirga abyssicola
Pathway
fay03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Q4Q34_17580 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fay03400
]
Q4Q34_17580 (nth)
Enzymes [BR:
fay01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Q4Q34_17580 (nth)
DNA repair and recombination proteins [BR:
fay03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Q4Q34_17580 (nth)
Prokaryotic type
Q4Q34_17580 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
WVK13028
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All DBs
Position
4187657..4188316
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AA seq
219 aa
AA seq
DB search
MTKQERVNFVINTLYKLYPEIPIPLDHKDPYTLLIAVLMSAQSTDVRVNKITPLLFERAD
NPYDMVKLSVEEIRDIIKPVGLSPMKSKGIHGLSEILIKKHNGKVPQSFEALEALPAVGH
KTASVVMSQAFGIPAFPVDTHIHRLMYRWNLSNGKNVVQTEKDAKRLFPKELWNDLHLQI
IWYGREYSPARGWNLDKDIITKTIGRQSVINEYNKLKKS
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaacaagaaagagtaaactttgttattaatacactttataaactttatccggaa
atccctattcctttagatcataaagacccttacaccttattaatagcagtattaatgtct
gcgcaaagcactgatgtaagggttaataaaatcacccctttactatttgaaagagcagac
aacccgtatgatatggtcaagctttcggtagaagaaataagagacattataaaacccgtt
ggcttatctccaatgaaaagcaaaggcattcacggcttatcggaaatacttataaaaaaa
cataatggcaaagtaccacaaagctttgaagcacttgaagctttaccagccgttggacat
aaaacagccagtgttgttatgtctcaagcctttggaatccctgcttttcctgtagatacg
cacattcataggttaatgtatcgttggaatttaagtaatggtaaaaatgttgtacaaaca
gaaaaagacgcaaaaagattgttcccaaaagaattatggaatgacttacaccttcaaatt
atttggtatggtagagagtattcacctgcacgaggctggaacctagataaagatattatc
acaaaaacaattggcaggcaatctgttatcaatgaatataataaattaaaaaagtcctga
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