Flavobacterium branchiophilum: FBFL15_0927
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Entry
FBFL15_0927 CDS
T01625
Symbol
nth
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
fbr
Flavobacterium branchiophilum
Pathway
fbr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FBFL15_0927 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fbr03400
]
FBFL15_0927 (nth)
Enzymes [BR:
fbr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
FBFL15_0927 (nth)
DNA repair and recombination proteins [BR:
fbr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FBFL15_0927 (nth)
Prokaryotic type
FBFL15_0927 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
CCB69027
UniProt:
G2Z7C2
LinkDB
All DBs
Position
1091308..1091946
Genome browser
AA seq
212 aa
AA seq
DB search
MTKRERVKFVIQTLNELYPTIPIPLDHKDPYTLLIAVLLSAQCTDVRVNQITPILFAKAD
NPYDMVKLSIEDIKTIIRPCGLSPMKSKGIHGLSQILIDQHNGKVPQSFEALEALPAVGH
KTASVVMSQAFGVPAFPVDTHIHRLMTRWNLTSGKNVVQTEKDAKAIFPKKLWNDLHLQI
IWYGREYSPARGWDIEKDIITKKIGKTNQIIS
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaagagaacgggtcaaatttgtaattcaaacattgaacgagttgtatcccaca
attcccattccgctagaccataaagacccttataccttgttgatagccgtgttgttatcg
gcacaatgtacagatgttcgggtcaatcaaattacacccatattgtttgcaaaagcagac
aacccctatgatatggtcaaattatcgatagaagacatcaaaacaataatcaggccttgt
ggcttgtcgcccatgaaatctaaaggtattcatggactttcacaaattttgatagaccag
cacaacggcaaagtcccgcaaagttttgaagccctagaagccttgcctgccgttggccat
aaaacggccagtgtggtaatgagtcaggcatttggagtaccagcttttcctgtagatacc
cacatccataggctcatgacacgatggaatttgacttcgggcaaaaacgtggtgcaaaca
gaaaaagatgccaaagccatttttccaaaaaaactttggaacgatttacacctccaaatc
atttggtacggacgtgagtattcgcctgccagaggctgggatattgaaaaagatattata
accaaaaaaataggaaaaacaaatcaaataatatcataa
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