Firmicutes bacterium ASF500: N510_000624
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Entry
N510_000624 CDS
T10173
Symbol
pdg
Name
(GenBank) Ultraviolet N-glycosylase/AP lyase
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
fbs Firmicutes bacterium ASF500
Pathway
fbs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fbs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
N510_000624 (pdg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fbs03400
]
N510_000624 (pdg)
Enzymes [BR:
fbs01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
N510_000624 (pdg)
DNA repair and recombination proteins [BR:
fbs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
N510_000624 (pdg)
Prokaryotic type
N510_000624 (pdg)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_5
RecR_HhH
DUF3349
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
USF25712
LinkDB
All DBs
Position
complement(615713..616366)
Genome browser
AA seq
217 aa
AA seq
DB search
MNKTPEDVRAIVEELKVLYPDGICSLDYKKDYELLFSVRLAAQCTDERVNKVTPALYARF
PTLEALANAEISEVEEYIHSTGFFRAKAKDIVLASQMLIRDYGGRVPDTMEDLLKLPGVG
RKTANLILGDVYHTPGVVVADTHCIRITGLLGLTDGTKDPAKVEKQLRAVLPPEESNDFC
HRMVLHGRAVCIARRPQCAGCTLRPWCDHFAKNGEAE
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgaataagacccccgaggatgtccgcgccattgtagaggagctgaaggtgctctacccg
gacggcatctgctccttggactataaaaaggattatgagctgttgttttctgtccggctg
gccgcccagtgtaccgacgagcgggtgaacaaggtgaccccggcgctgtatgcccggttc
cccaccctggaggcgctggcaaacgccgagatctccgaggtggaggagtacatccactcc
accggctttttccgggccaaggccaaggacatcgttctggcctcccagatgctgattagg
gattatggcggaagggtccccgacaccatggaggacctgctcaagctccccggcgtgggc
cgtaagacggccaacctgattctgggggatgtgtaccacacccccggcgtggtggtggcc
gacacccactgcatccgcatcaccggcctgctgggcctcaccgacggtaccaaggacccc
gccaaggtggaaaagcagctgcgggccgtcctgcccccggaggagtccaacgacttctgt
catcgcatggtcctccacggccgggcggtgtgtatcgcccgccggccccagtgcgcgggg
tgtaccctgcggccctggtgcgaccacttcgccaaaaacggcgaggcagaataa
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