Flavobacteriaceae bacterium UJ101: UJ101_01105
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Entry
UJ101_01105 CDS
T04720
Symbol
NTH
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
fbu
Flavobacteriaceae bacterium UJ101
Pathway
fbu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fbu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
UJ101_01105 (NTH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fbu03400
]
UJ101_01105 (NTH)
Enzymes [BR:
fbu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
UJ101_01105 (NTH)
DNA repair and recombination proteins [BR:
fbu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
UJ101_01105 (NTH)
Prokaryotic type
UJ101_01105 (NTH)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
DUF3349
RecR_HhH
CPDase
Motif
Other DBs
NCBI-ProteinID:
APD06633
LinkDB
All DBs
Position
1252315..1252974
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AA seq
219 aa
AA seq
DB search
MTKQEKVQFVIDELEKLYPETPIPLDHYSPYTLLLAVLMSAQTTDKKVNEVTPALFQKAD
TPHLMIQLSWEEIKEYIKQIGLSTTKAKNIRKLSEILINQHNGNVPQTYEELEALPGVGH
KTASVVMSQAFGFPAFPVDTHIHRLMWRWGLSNGKDVKQTEKDAKRLFPEVLWNKLHLQI
IYYGREYSPARNMKLNIDFITQTIGRKEVILDPSKKISV
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagcaagaaaaagtacaatttgtaattgatgaattggaaaaattatatcctgaa
actccaattcctttagatcactactcaccttacacccttttattagctgttttaatgtct
gctcaaacaacagacaaaaaagtaaatgaagtaacacctgctctttttcaaaaagcagat
actcctcatcttatgattcagctaagttgggaagaaataaaagaatacatcaaacaaatt
ggcttgtcaactaccaaagcaaaaaacattcgtaaactttctgaaattttaattaatcaa
cataatggtaacgttcctcaaacttatgaggaattagaagcattacctggtgttggacat
aaaacagcttccgttgtcatgagtcaagcttttggatttccagcttttcctgttgataca
catatacatcgtttaatgtggcgctgggggctatcaaatgggaaggatgtaaaacagact
gaaaaagatgctaaacgcctcttccctgaagtcttatggaataaactgcaccttcaaatc
atctactatggaagagaatattctcctgcaagaaacatgaaattaaacatagattttata
acacaaacaattggaagaaaagaagttatacttgacccttctaagaaaatatctgtttaa
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