Felis catus (domestic cat): 101081014
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Entry
101081014 CDS
T02385
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
fca
Felis catus (domestic cat)
Pathway
fca03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fca00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101081014 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fca03041
]
101081014 (EFTUD2)
Spliceosome [BR:
fca03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
101081014 (EFTUD2)
Complex C
U5 SnRNP specific factors
101081014 (EFTUD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
101081014
NCBI-ProteinID:
XP_003997041
UniProt:
M3W441
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All DBs
Position
E1:complement(42890227..42929986)
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AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDEDDDELGRETKDLDEMDDEDDDDDVGDHDEDHPGMEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFTLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLIL
SPLLGNVCFSSSQYSICFTLGSFAKIYADTFGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFILEPLYKILAQVVGDVDTSLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKVGAKPKIEHTYTGGVDSDLGEAMSDCDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVVAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggataccgacttatatgacgagtttggaaattatattggaccagagcttgattctgat
gaagatgatgatgaactgggcagagagaccaaagatcttgatgagatggatgatgaagac
gatgacgatgacgtaggagatcacgatgaggaccaccctgggatggaggtggtgctgcac
gaggacaagaagtactaccccacagctgaggaggtgtacggtcctgaggtggagaccatc
gtgcaagaggaagacacccagcctctcaccgaacctataattaagccggtgaaaaccaag
aagttcactctgatggagcagactttacctgtcacggtgtatgaaatggacttcttggca
gatttgatggataactcggagctcatcagaaatgtgaccctctgtggccatctccaccat
ggcaagacatgttttgtagattgtttaatagagcagactcacccggaaatcaggaagcgc
tatgaccaagatctgtgctacactgacatcctcttcacagagcaggagagaggtgttggc
atcaaaagcactccagtgacagtggtcttgccagataccaaaggaaagtcttacctcttc
aatatcatggacactccaggacatgtgaatttttctgatgaggtcacagctggcttgcgc
atctcagatggagttgtccttttcatcgatgcggctgaaggggtgatgctaaacacagag
cggctgatcaagcacgcagtacaggagaggctggcggtcaccgtgtgcatcaacaagatt
gaccggctgatcctggagctaaagctgcctccaactgatgcttattataagctgcgccac
atcgtagatgaggtcaacggattaataagcatgtactccaccgatgagaacctgatcctt
tccccactcctgggcaacgtctgcttctccagctcccagtacagcatctgcttcacactc
ggctcctttgccaagatctatgctgacaccttcggtgacattaactaccaggaatttgct
aaaagactctggggtgacatctacttcaaccccaaaacacgaaaattcacaaaaaaggcc
ccaaccagcagctcccagaggagctttgtggagtttatcttggagcctctgtataagatc
cttgctcaggttgtgggtgacgtggacaccagcctccccaggaccctggatgagcttggc
attcatctgaccaaagaagagcttaagctgaatatccgccccctgctcaggctggtctgc
aaaaaattctttggtgaattcacaggctttgtggacatgtgtgtgcagcatatcccctct
ccaaaggtgggcgccaagcccaagattgagcacacctacactggcggtgtagattctgat
ctcggcgaggccatgagcgactgtgatcctgacggtcccctgatgtgccacaccaccaag
atgtacagcacggatgatggagttcagtttcatgcctttggccgggtgctgagtggcacc
atccatgctgggcagcccgtgaaggtgctgggggagaactacaccctggaggatgaggaa
gactcccagatatgcaccgtgggtcgtctttggatctctgtggccaggtaccacattgag
gtgaaccgtgttcctgctggcaactgggttctgatcgaaggtgttgatcaaccaattgtg
aagacagcaaccataactgaaccccgaggcaatgaggaggctcagattttccgccccttg
aagttcaacaccacatccgttatcaagattgctgtggaaccagtcaacccctcagagcta
cccaagatgctggacggtctgcgcaaggtcaataagagctatccatccctcaccaccaag
gtggaagagtctggagagcacgtgattctgggtactggggagctgtacctcgactgtgtg
atgcacgatttacggaagatgtactcagagatcgacatcaaggtggctgatcccgttgtc
acgttttgtgagacggtggtggagacatcttccctcaagtgctttgctgaaacgcccaat
aagaagaataagatcaccatgattgctgagcctctcgagaagggcctcgccgaggacata
gagaatgaggtggtccagatcacgtggaacaggaagaaactgggagaattcttccagacc
aagtacgattgggatctgctggctgcccgttctatctgggcttttggccctgatgccacc
ggccccaacatcctggtggatgataccctgccttctgaggtggacaaggctcttcttggc
tcagtgaaggacagcattgttcaaggtttccagtggggaaccagggaggggcccctctgt
gacgagttgattcgaaatgtcaagtttaagatcctggatgcagtggttgcccaagagccc
ttgcaccggggcgggggccaaatcatccccacggccaggagagttgtctattctgccttc
ctcatggccactcctcgtctgatggagccttactacttcgtggaggtccaggcccctgca
gattgtgtctctgctgtgtatactgtcctggccaggcgcagggggcatgtgactcaggat
gcacccatcccaggctcccctctctacaccatcaaagctttcatccccgccattgactct
tttggctttgagaccgatctgcggactcacacccaggggcaggccttttccttgtctgtc
ttccaccattggcagattgtgcccggtgatcctctggacaagagcattgtcatccgtccc
ctggagccacaaccagctcctcacctggcccgagaattcatgatcaaaacccgtcgcagg
aagggactgagtgaggatgtgagcatcagcaagttctttgatgatcccatgttgctggag
ctcgccaagcaggatgttgtgctcaattaccccatgtga
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