Flavobacterium channae: LOS89_08390
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Entry
LOS89_08390 CDS
T08502
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
fcb
Flavobacterium channae
Pathway
fcb01501
beta-Lactam resistance
fcb01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
fcb00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LOS89_08390
01503 Cationic antimicrobial peptide (CAMP) resistance
LOS89_08390
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fcb02000
]
LOS89_08390
01504 Antimicrobial resistance genes [BR:
fcb01504
]
LOS89_08390
Transporters [BR:
fcb02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LOS89_08390
Antimicrobial resistance genes [BR:
fcb01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LOS89_08390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
ABC_membrane
Motif
Other DBs
NCBI-ProteinID:
UGS22796
LinkDB
All DBs
Position
complement(1816416..1819604)
Genome browser
AA seq
1062 aa
AA seq
DB search
MFKNFIKRPVMAIVVSLIIIFLGLLSIKTLPISQFPEIAPPRVLITLAYPGASAEVLEKS
SLIPLERAINGVPGMRYIVSDATSAGEATIQILFDLGTDPNEAVVNVKNRVDKVINTLPE
LVQLEGVIVQVVQPSMLMYINLYSEDKHADEKFLYNYANVNIIPEIQRIKGISTAQILGN
RNYAMRIWLNPDRMRAYNVSTDEVMKAMAEQSLIGRPGRLGQATGIKAQSLEYVLVYKGR
FNKPEEYENIIVRANAEGEIIKIKDIGKVQFGSEFFDIYSNKDGHPSAAIQLKQVYGSNA
SEVIEGVKHKLEELKGAFPPGMKYEVSYDVSSFLDASIEKVIHTLGEAFVLVAIVVFIFL
GDWRSTLIPIIAVPISLIGAFIFMKMFGLTINLITLFALVLAIGVVVDDAIVVVEAVHLK
MEEDHIGPFKAVQRVLGEIGGAVVAITLLMTSVFIPVAFMSGPVGVFYRQFAITMASSIV
LSGVVALTLTPVLCAMILKNNHGKPRKKTPINMFIDAFNRMFEKLTGKYTNILTKIVDRR
LVTFLALGGFAVSTIFVSETLPSGFIPGEDQGMIYAIIQTPPGSTLETTNAVSRKLQSIA
EHVEGVQSVSSLAGYEILTEGRGSNAGTCIINLKPWSERKNSVHEVIEELEKETKDFGAV
IEYFEPPAVPGYGAAGGLSFRLLDKTNSGDYYSFDKINKQFMDDLGKRKELTGLFTFYAA
NYPQYEIIIDNQKAMQKGVSIGTAMENLNILIGSTFEQGFIRFNNYFRVYTQADPSFRRN
PNDLLQYYVKNDKGEMVPYSAFMTLKKRQGPNEITRYNLYNSATIRAVPAKGYTTGESIK
VINEVAKQTLPNGYDVAWEGLTFDEAQRGNEAILIFGIVLIFVYFVLSAQYESFILPFAV
VLSLPAGIFGTFFLLKLFGLANDIYAQVGLVMLVGLLGKNAVLIVEFAVQKTQQGMSIFD
AAIEGAKVRFRPILMTSFAFIAGLIPLVKATGAGAIGNRTIGTAALGGMLFGTIFGVLLI
PGLYYIFAKLAEGRKMIKNEDFTPLTEDYHYIDSDKDKHEKK
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgtttaagaattttatcaaacgacctgttatggcgatcgttgtatcgctcataataata
tttttagggttattgtcaattaaaacattgccaatttctcaattccctgaaattgcacct
ccaagggttttaattacattagcttatccaggagcaagtgccgaagtattagaaaaatcg
tcattaattccattagaaagagcaattaatggtgtaccaggaatgcgttatattgtttct
gatgcaactagtgccggtgaagctacaatccaaattttatttgatttaggaacagatcct
aatgaagcggttgttaacgttaaaaaccgtgtagacaaagtaatcaatactttaccagaa
cttgttcagcttgaaggggttattgtacaagttgtacagcctagtatgttgatgtacatc
aacttatatagtgaagataagcatgctgacgagaagtttttgtataactatgccaatgtt
aatattattcctgaaatccaacgtattaaagggatttctactgctcaaatcttaggtaac
cgtaattacgcaatgcgtatttggttaaatcctgatagaatgcgtgcttataatgtttct
actgacgaagttatgaaagcgatggctgagcaaagtcttattggtagaccaggacgttta
ggtcaggctaccggtataaaagcgcagtcattagaatatgtattggtatacaaaggaagg
tttaataaaccagaagaatatgagaatataattgttagagctaatgctgaaggggaaatt
atcaagattaaggatattggaaaagttcaatttggaagtgaatttttcgatatttactct
aacaaagacggacacccttctgcggctattcaattaaaacaagtatacggtagtaacgca
tctgaagtaattgaaggtgttaaacacaaattagaagaattaaaaggagctttccctcct
ggaatgaaatacgaggttagttatgacgtttcgagcttcttagacgcttctattgaaaag
gtaatccatactttaggtgaagcctttgtattagtagcaatcgtagtatttattttcttg
ggagattggcgttcaacgcttattccaattattgctgtaccaatttcattaattggagcc
tttatctttatgaagatgtttgggttaaccatcaacttaattacattatttgccttagta
cttgcaattggggtcgtagtagatgatgcgatagtcgtcgtcgaggccgtccacctcaag
atggaggaagaccatattggaccatttaaagctgtacaaagagtattgggagaaattggt
ggagccgttgtagcgattacgttattaatgacttccgtatttattccagtagcctttatg
tcgggacctgttggggtattttatcgacagtttgctattacaatggcctcgtctattgta
ctttcaggagttgttgcacttactttaactccggttttatgtgcaatgattcttaaaaat
aaccatggtaaacctagaaagaaaacacctattaacatgtttattgatgcatttaataga
atgtttgaaaaactaacaggaaaatatactaacattctgactaagattgttgatagaaga
cttgtaacatttttagcattaggaggatttgccgtttctacaatttttgtgagtgagaca
ttaccttcagggtttattccaggtgaagatcaaggtatgatttatgccattattcaaaca
cctccaggttcaactttagaaactaccaatgcggtttcaagaaaattacaatctatcgct
gagcatgtagaaggtgtacaatcggtttcttcgttagcgggttatgaaattcttacggaa
ggtaggggttctaatgctggtacatgtatcatcaacttaaaaccatggtctgaaagaaag
aattcggttcatgaagttattgaagaattagaaaaagaaactaaagactttggtgctgta
attgaatattttgaaccaccagcggttccaggatatggtgcagcaggaggattatctttc
cgtttattagataaaacgaatagtggcgattattattcatttgataaaatcaataaacaa
ttcatggatgatttaggaaaacgtaaagagttaacaggattgtttactttttatgctgca
aattatcctcaatacgaaattattattgataaccaaaaagcaatgcaaaaaggggtttct
attggaacagcaatggaaaacttaaatatcttaattggtagtacatttgagcaaggtttt
attcgttttaataattatttcagggtatatactcaggcagatccttcattcagaagaaat
ccaaatgatttgttacaatactatgtaaaaaacgataaaggagaaatggttccgtattct
gcatttatgactttgaaaaaacgtcaaggaccaaatgagattacacgttataatttatac
aattcggcaacaattagagccgttcctgcaaaaggatatacaacaggagaatcaatcaaa
gtaattaatgaagtagccaaacaaacacttccaaatggatatgatgtagcttgggaagga
ttaacttttgatgaggctcaaagaggaaatgaagcaattcttattttcggaatcgtatta
atcttcgtttactttgtattatcggctcagtatgagagttttattttaccatttgcggtt
gttctttctttacctgccggaatttttggaacattcttcttgttaaaactatttggttta
gcaaatgatatttatgcacaagtaggattagtaatgcttgtaggattactcggtaagaat
gccgttttaattgttgagtttgctgtccagaaaacccaacaaggaatgtcaatttttgat
gcagcaattgaaggagcaaaagttcgttttagaccaatcttaatgacatcattcgcattt
attgccggattaattccattagtaaaagcaacaggtgctggtgcaattggaaacagaact
attggtacagctgcgcttggaggaatgttattcggaaccattttcggggttttattaatt
cctgggttgtactacatttttgccaaattagctgaaggaagaaaaatgattaaaaacgaa
gactttactccgttaacagaagattaccactatattgattctgataaagataaacatgaa
aagaaataa
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