Flavobacterium channae: LOS89_08390
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Entry
LOS89_08390 CDS
T08502
Name
(GenBank) efflux RND transporter permease subunit
KO
K03296
hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
Organism
fcb
Flavobacterium channae
Brite
KEGG Orthology (KO) [BR:
fcb00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99977 Transport
LOS89_08390
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
ABC_membrane
Motif
Other DBs
NCBI-ProteinID:
UGS22796
LinkDB
All DBs
Position
complement(1816416..1819604)
Genome browser
AA seq
1062 aa
AA seq
DB search
MFKNFIKRPVMAIVVSLIIIFLGLLSIKTLPISQFPEIAPPRVLITLAYPGASAEVLEKS
SLIPLERAINGVPGMRYIVSDATSAGEATIQILFDLGTDPNEAVVNVKNRVDKVINTLPE
LVQLEGVIVQVVQPSMLMYINLYSEDKHADEKFLYNYANVNIIPEIQRIKGISTAQILGN
RNYAMRIWLNPDRMRAYNVSTDEVMKAMAEQSLIGRPGRLGQATGIKAQSLEYVLVYKGR
FNKPEEYENIIVRANAEGEIIKIKDIGKVQFGSEFFDIYSNKDGHPSAAIQLKQVYGSNA
SEVIEGVKHKLEELKGAFPPGMKYEVSYDVSSFLDASIEKVIHTLGEAFVLVAIVVFIFL
GDWRSTLIPIIAVPISLIGAFIFMKMFGLTINLITLFALVLAIGVVVDDAIVVVEAVHLK
MEEDHIGPFKAVQRVLGEIGGAVVAITLLMTSVFIPVAFMSGPVGVFYRQFAITMASSIV
LSGVVALTLTPVLCAMILKNNHGKPRKKTPINMFIDAFNRMFEKLTGKYTNILTKIVDRR
LVTFLALGGFAVSTIFVSETLPSGFIPGEDQGMIYAIIQTPPGSTLETTNAVSRKLQSIA
EHVEGVQSVSSLAGYEILTEGRGSNAGTCIINLKPWSERKNSVHEVIEELEKETKDFGAV
IEYFEPPAVPGYGAAGGLSFRLLDKTNSGDYYSFDKINKQFMDDLGKRKELTGLFTFYAA
NYPQYEIIIDNQKAMQKGVSIGTAMENLNILIGSTFEQGFIRFNNYFRVYTQADPSFRRN
PNDLLQYYVKNDKGEMVPYSAFMTLKKRQGPNEITRYNLYNSATIRAVPAKGYTTGESIK
VINEVAKQTLPNGYDVAWEGLTFDEAQRGNEAILIFGIVLIFVYFVLSAQYESFILPFAV
VLSLPAGIFGTFFLLKLFGLANDIYAQVGLVMLVGLLGKNAVLIVEFAVQKTQQGMSIFD
AAIEGAKVRFRPILMTSFAFIAGLIPLVKATGAGAIGNRTIGTAALGGMLFGTIFGVLLI
PGLYYIFAKLAEGRKMIKNEDFTPLTEDYHYIDSDKDKHEKK
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgtttaagaattttatcaaacgacctgttatggcgatcgttgtatcgctcataataata
tttttagggttattgtcaattaaaacattgccaatttctcaattccctgaaattgcacct
ccaagggttttaattacattagcttatccaggagcaagtgccgaagtattagaaaaatcg
tcattaattccattagaaagagcaattaatggtgtaccaggaatgcgttatattgtttct
gatgcaactagtgccggtgaagctacaatccaaattttatttgatttaggaacagatcct
aatgaagcggttgttaacgttaaaaaccgtgtagacaaagtaatcaatactttaccagaa
cttgttcagcttgaaggggttattgtacaagttgtacagcctagtatgttgatgtacatc
aacttatatagtgaagataagcatgctgacgagaagtttttgtataactatgccaatgtt
aatattattcctgaaatccaacgtattaaagggatttctactgctcaaatcttaggtaac
cgtaattacgcaatgcgtatttggttaaatcctgatagaatgcgtgcttataatgtttct
actgacgaagttatgaaagcgatggctgagcaaagtcttattggtagaccaggacgttta
ggtcaggctaccggtataaaagcgcagtcattagaatatgtattggtatacaaaggaagg
tttaataaaccagaagaatatgagaatataattgttagagctaatgctgaaggggaaatt
atcaagattaaggatattggaaaagttcaatttggaagtgaatttttcgatatttactct
aacaaagacggacacccttctgcggctattcaattaaaacaagtatacggtagtaacgca
tctgaagtaattgaaggtgttaaacacaaattagaagaattaaaaggagctttccctcct
ggaatgaaatacgaggttagttatgacgtttcgagcttcttagacgcttctattgaaaag
gtaatccatactttaggtgaagcctttgtattagtagcaatcgtagtatttattttcttg
ggagattggcgttcaacgcttattccaattattgctgtaccaatttcattaattggagcc
tttatctttatgaagatgtttgggttaaccatcaacttaattacattatttgccttagta
cttgcaattggggtcgtagtagatgatgcgatagtcgtcgtcgaggccgtccacctcaag
atggaggaagaccatattggaccatttaaagctgtacaaagagtattgggagaaattggt
ggagccgttgtagcgattacgttattaatgacttccgtatttattccagtagcctttatg
tcgggacctgttggggtattttatcgacagtttgctattacaatggcctcgtctattgta
ctttcaggagttgttgcacttactttaactccggttttatgtgcaatgattcttaaaaat
aaccatggtaaacctagaaagaaaacacctattaacatgtttattgatgcatttaataga
atgtttgaaaaactaacaggaaaatatactaacattctgactaagattgttgatagaaga
cttgtaacatttttagcattaggaggatttgccgtttctacaatttttgtgagtgagaca
ttaccttcagggtttattccaggtgaagatcaaggtatgatttatgccattattcaaaca
cctccaggttcaactttagaaactaccaatgcggtttcaagaaaattacaatctatcgct
gagcatgtagaaggtgtacaatcggtttcttcgttagcgggttatgaaattcttacggaa
ggtaggggttctaatgctggtacatgtatcatcaacttaaaaccatggtctgaaagaaag
aattcggttcatgaagttattgaagaattagaaaaagaaactaaagactttggtgctgta
attgaatattttgaaccaccagcggttccaggatatggtgcagcaggaggattatctttc
cgtttattagataaaacgaatagtggcgattattattcatttgataaaatcaataaacaa
ttcatggatgatttaggaaaacgtaaagagttaacaggattgtttactttttatgctgca
aattatcctcaatacgaaattattattgataaccaaaaagcaatgcaaaaaggggtttct
attggaacagcaatggaaaacttaaatatcttaattggtagtacatttgagcaaggtttt
attcgttttaataattatttcagggtatatactcaggcagatccttcattcagaagaaat
ccaaatgatttgttacaatactatgtaaaaaacgataaaggagaaatggttccgtattct
gcatttatgactttgaaaaaacgtcaaggaccaaatgagattacacgttataatttatac
aattcggcaacaattagagccgttcctgcaaaaggatatacaacaggagaatcaatcaaa
gtaattaatgaagtagccaaacaaacacttccaaatggatatgatgtagcttgggaagga
ttaacttttgatgaggctcaaagaggaaatgaagcaattcttattttcggaatcgtatta
atcttcgtttactttgtattatcggctcagtatgagagttttattttaccatttgcggtt
gttctttctttacctgccggaatttttggaacattcttcttgttaaaactatttggttta
gcaaatgatatttatgcacaagtaggattagtaatgcttgtaggattactcggtaagaat
gccgttttaattgttgagtttgctgtccagaaaacccaacaaggaatgtcaatttttgat
gcagcaattgaaggagcaaaagttcgttttagaccaatcttaatgacatcattcgcattt
attgccggattaattccattagtaaaagcaacaggtgctggtgcaattggaaacagaact
attggtacagctgcgcttggaggaatgttattcggaaccattttcggggttttattaatt
cctgggttgtactacatttttgccaaattagctgaaggaagaaaaatgattaaaaacgaa
gactttactccgttaacagaagattaccactatattgattctgataaagataaacatgaa
aagaaataa
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