Folsomia candida: 110861719
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Entry
110861719 CDS
T05043
Name
(RefSeq) structural maintenance of chromosomes flexible hinge domain-containing protein 1-like
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
fcd
Folsomia candida
Brite
KEGG Orthology (KO) [BR:
fcd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fcd03036
]
110861719
03400 DNA repair and recombination proteins [BR:
fcd03400
]
110861719
Chromosome and associated proteins [BR:
fcd03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
110861719
DNA repair and recombination proteins [BR:
fcd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
110861719
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMCHD1_S5
HATPase_c_3
SMC_hinge
Ig_GEX2_N
HATPase_c
GrpE
Motif
Other DBs
NCBI-GeneID:
110861719
NCBI-ProteinID:
XP_021966538
LinkDB
All DBs
Position
Unknown
AA seq
2047 aa
AA seq
DB search
HNVGAFAIAEFVDNSLTATANNKERRKIQIEFHNNGSNSYLAVLDNGCGMNSEMLQTGLK
FKAPKDSRPNDVSDLPTQSVNPGSDEEAAREEIHPIFLNSNISKFGAGLKQAVFWLGDDA
KIITKRAESRTVYEVHYSRENMEAKESAKSEDAWNVAIKMRDVSELKGVQVPPLLKALIE
ARETSEPSFTYIMIQNLIKGDATSPLQFLQQQDSSLDVKPSIEKQLAHIYHYYLHGRDGN
TGKESMNGTMVDIEVTRFDSTGKKVSSINLRELVEANLDLESRFVRTAASDPFRFTIEVL
KSQRVNGPMIPKLRLGGIIRYHPYEYYHETYPVNKVANISGSLDPRDVNSDQTLQPMEDK
NYRIDNKDFFHLWWNGRLIPCTKLDAFPWCSPSERGKNPDKLYKSYGRISGSLFLDGHIC
EITDNKLNLTTTTKISEIIDKKIHSVQSTFKLVKSHGNTLKAKRVGNDVRKAFEAWLTTC
QKYDKEVCYTNVLRDSQKGPIIRKVRFQTYFEYGAAEWKESGIKLQVGDAVQLKTSSIIL
GKIKSFYVQFENCLLEDEYVANSSTRPLPEVHAPVSYFDIEHCPAPYYARDGEEIPIRRK
RMSQIDTTRLQVSVEELIARQADELNLKFEIIKGPIPEFGNGFKIKSDGILFKSLGLDIV
KVNGEGSVEGYLPFCQPRKKHIFVVTQIHKIDNNNKRELCHTMESCNYSRPATNPHGYYF
NTFAVTKLGCSKIGDYIITFRAYISEQPFVRATQSRVATVMSRNTPSGRATPNRLIDPPY
EIEWEQEVDFHGRKILKDGEKKIRLPYYEIKYSVVAGLPDKFKIEAFDNEDHHRIGIGFK
MNVSFKDSNGNAASAKNLESELTTLTQQLKISLVPIKKSQNFNLTITYGALSIEGDQLVI
NNVIASGFLNAADFKEGRIDVEMTLNNRTKTSSSSKIRFYSGFPVRIECLEKHVEIENGC
RPGLSCRVLDCGGNVVVANEEDKKPITLRCRIIKKTNHQFACERTILATNSVCKTNEVID
VDEFKKFGITQVDLLCEISCELYSNIKPVLVPITIKRSTRAEKLLVYRRSIEDEQNTVEI
CDKSVQFIQILKELYLSYKLFDGMGNPVVFDESKYKVNVSWSKNACLENGILPTHKVPKR
AEEKTEFRTTLQILGFEEELKHIFYLTSLPLEPDTMSVSFVGGNNSRDLVQLPMGEKLPA
AVVKIMDRWSNIILYGLRDEELSIEVDCSREEEFQVAFDPVREDIDNGGSFLVKDLDISI
PSGRNLPIGEMVLKVTFRDLSSDLKLSVTTGYPKKLGFVINDQKQKQRGTFTCQNGSEVR
IFARLLDAFNNFTISRTPIEVKFLQTQDGVTVIEKKIMMSADGVVDFGVICPDVKTNPNR
YSSCVVKVNDCRGRCFGKPITVTVMGNVDGHERSDVCHFHVTCRSDFPYQLIPHKVEGLG
PFRYEAGSSFTNLTVTLLSEDGTKYTSAEKEKVSLHLKPTNGISGVHLEPILASGVHEGI
YTFDQVPPEAGNYEAKFCYQNGTVEISEILKEPLEIYAGSVHALKPETDLRDLSVSNNSE
NDEDRIIVENLKLIIVDRFGNVCTEGENSDDGNSNLSRGDVTIDFPGEMKLQNLENCTTL
SSKIALINGYVSIPKLAVVAGLPLPNNSKHTIRFILKMESSSEFVFPLEFTFFNNSEQMA
ANRKLREEIATLEGEIANKKQSFQSSENSMMLIQAKIEGLRERERQEKEILKNISSQEFV
ETLKMSKDVTDREACLKTTEKELEGERNMTKSNIPPGPGAGEPNVFGPIGLLAEIKRGGD
ISIDLNLRRILSWHLQNKLSVIVTATSKTGRDLEKLFPKEQFMLLDIIKDYPPNTVALSG
PGNPVYARTLLNFTKPEATAATRKVLNKILGDTIIMDDLPTAIDFMKKYNQGRYNCPTIL
TMDGRRLTSDGIIGGSATHVPKSVRFSFGLASGVELAQIQEQLKILPTLKKIMEEAEQVE
RTDGPRLKSLRASCIKSKENIGKLEERRMKVVERLEGSMPRGKNQPRRTRLTRGEDHEIT
NKKARRT
NT seq
6146 nt
NT seq
+upstream
nt +downstream
nt
aacataacgtgggtgcatttgccatcgcggaatttgtggataattccttaaccgccaccg
ctaataacaaggagaggagaaaaatacaaatcgagttccacaacaatggatcaaattcat
atttggccgtgttagacaacgggtgcgggatgaattcggagatgctgcaaactggcttaa
aattcaaagcaccaaaagattcacgtcccaacgacgtgtcagacttacccacccaatcag
taaacccgggaagtgacgaggaagccgcaagggaggaaattcatcctattttccttaact
caaacattagcaaatttggagcaggattaaaacaagccgttttctggttgggagatgatg
ccaaaattataacaaagagggcagaaagtagaacggtgtacgaagttcattactcacggg
aaaatatggaagctaaagaatcagccaagagtgaagatgcctggaatgttgctattaaga
tgcgtgacgtgtcggaattaaaaggcgtacaggtccctccattgctgaaagccttaatcg
aagcgagggaaacatcagagccaagctttacatatattatgatccaaaacttgataaaag
gtgatgctacctctcccctccaatttctccagcaacaggatagtagtctcgatgtcaagc
ccagcattgaaaaacaattggctcacatttaccactattatctccatggtcgagacggaa
atactggaaaagaatcaatgaatggcactatggtcgatatagaagttactcgatttgatt
caaccgggaaaaaagtgtcatcaattaatttacgcgaattggttgaagcaaatttggact
tggaatcaagatttgttcggacagcggcgtcagatccgttccgtttcacaattgaagttt
taaaatcccaacgagttaacggacccatgattccaaagttgagacttggaggcataattc
ggtaccatccctatgaatattaccacgaaacttatccagtcaataaggtggcaaatattt
ccggtagtcttgacccacgtgacgtcaactctgatcaaacccttcaaccaatggaagaca
aaaattatcggatagataataaagatttttttcatctatggtggaacggaagattaattc
cttgcacgaaattggatgcgtttccatggtgtagcccttcagagaggggtaaaaatcctg
acaagttgtacaagtcttacgggcgcatatcaggctcgctttttcttgacggtcacattt
gtgaaattaccgacaacaaattaaatcttacaacaacgacgaaaatatctgaaataattg
ataaaaagattcattcagttcagtcgacctttaaactggttaaatcccacggaaacactc
ttaaagcaaaacgtgtgggaaatgatgttagaaaagcttttgaagcttggttaacaacgt
gtcaaaaatatgacaaggaggtctgctacacaaacgtgttacgtgattcacagaagggtc
ccattataaggaaagttcgttttcaaacttactttgaatatggcgcagcagagtggaaag
agtccgggataaaattacaagttggtgacgctgttcaactgaaaaccagttcgattatct
tagggaaaattaaatctttctacgtccagtttgaaaattgtttgcttgaagatgaatatg
tggcaaattcaagcacccggccgcttcctgaagttcatgcacctgtttcctattttgata
ttgaacactgtcctgctccttattacgcgagggatggcgaggaaatcccgattcgtcgca
agaggatgagtcaaatagatacaacgcggctacaagttagtgtagaagagctaatcgcga
ggcaggcggacgagctaaatttaaaattcgaaataatcaaaggacctatccccgagtttg
gtaatgggtttaaaattaagagcgacggcattctgttcaaatcccttggacttgacattg
tcaaagtaaatggggaaggatccgtcgaaggctaccttccgttttgccagccaaggaaaa
aacatatatttgtggttacacaaatccataaaattgataacaacaataaaagagaattgt
gtcacactatggaaagctgtaattactctagaccggctacaaaccctcatggatactatt
tcaatacgtttgctgtaacaaaattaggttgctcgaaaattggggactatatcataactt
ttcgcgcatacatttccgagcagccattcgtccgggccacacagtcgagggtggcgacgg
taatgtccagaaataccccatcagggcgggctactccgaatcgattgattgatccaccat
atgaaatagagtgggaacaggaggtagatttccacggaaggaaaatattgaaagatggag
agaaaaagatacgactgccatattacgaaattaagtattctgtcgtggctggacttccag
ataagtttaagattgaagcatttgataatgaagatcaccatcgtattgggatagggttta
aaatgaatgtatcgtttaaagattcaaatggaaatgcagcatcggcaaagaatttagaat
cagaactaacaactttgacccagcaacttaaaatttctttggttcctatcaaaaaatccc
aaaactttaaccttaccatcacgtatggggctctaagcattgaaggagatcaattagtaa
tcaacaacgttattgccagtggcttcttaaatgcggctgattttaaggaaggtaggattg
acgttgaaatgacgttgaataaccgcaccaaaacttctagttcttccaaaattcgtttct
actctggttttccggtaaggattgagtgtttggaaaaacatgttgaaattgaaaatgggt
gcagacctggcttatcttgtcgcgtcctcgactgtgggggtaacgtcgtcgtagcaaatg
aggaggacaagaagccaatcacgcttaggtgtagaatcattaaaaaaaccaaccatcaat
ttgcctgtgagagaacgatactagcaacaaattctgtgtgcaaaacgaatgaagtaattg
atgttgatgaatttaaaaaatttggaataactcaagttgatctactttgcgaaatatcgt
gcgagttatacagcaatattaagcccgtcttagtgccaatcacaataaagcgcagcacaa
gagcagaaaaacttctggtttaccgaagatcaattgaagatgaacaaaatactgtagaaa
tttgtgataaatctgtccaatttatccaaattttgaaggaattgtacttaagctacaaac
tatttgatggaatgggaaatcccgtagtgtttgatgaaagcaagtacaaagtgaatgtaa
gttggtcgaagaatgcatgtcttgagaatggaatccttcctacgcacaaagttcctaaac
gggccgaggagaagacagaatttaggacaacgttacaaatcctaggattcgaggaagaac
taaagcacattttctacctgacatccctccccttggaaccggacactatgagtgtatcat
ttgtggggggaaacaactcccgtgacttagttcaactcccaatgggtgaaaagctgccag
ctgcagttgtcaaaattatggaccgttggagcaatattattctctatgggttaagggatg
aagaattatctattgaagtggactgttcccgtgaggaagagtttcaagtggcatttgatc
cagttcgtgaagacatcgataacgggggatcgtttctagttaaagatttagacatttcca
tacctagtgggagaaatcttcccataggtgaaatggttttgaaggttacttttagagatt
tgtcgtccgatttaaaattatccgtgactactggataccccaagaaactgggctttgtga
ttaatgaccaaaaacaaaaacaacggggaacctttacttgtcagaatggatcagaagttc
gaattttcgccagattactggatgcatttaataattttaccatatcaagaacaccaatcg
aagttaaatttttacagacacaggacggagtcactgtgattgagaaaaaaattatgatgt
cagctgatggcgttgttgattttggagtaatttgtccagatgtgaaaacaaacccgaatc
gttactcatcttgcgtggtaaaggttaatgactgcaggggaagatgttttggaaaaccga
ttaccgttacggtcatgggtaacgtggatgggcatgaaagatcagatgtttgccactttc
acgtaacatgtcgatcggattttccatatcagttaatcccacacaaagtggaaggactgg
gacccttcaggtacgaggcggggtcaagttttacaaatctaacggttactttgttgtcag
aggacggcaccaaatatacgtcagcagagaaggagaaagtttctctgcatcttaagccga
caaacggaatatcaggcgtacatttggaacccatccttgccagtggagtgcacgaaggta
tttacacatttgaccaagtacccccagaggcaggaaattatgaggcaaaattttgctatc
aaaatggaacagtggagatttcagaaatattgaaagaacccttggaaatttacgctggat
cagttcatgccctcaaaccggaaacagaccttcgcgacttgtctgtgtcaaacaattctg
aaaatgatgaagaccgaattattgtggaaaatttaaaactgatcattgtcgatcggttcg
ggaatgtttgcactgaaggcgaaaattcagacgacgggaacagcaatttaagtcggggag
atgtcacaatagattttcctggggaaatgaaactacaaaatttggaaaattgtactactc
tgagctcaaaaattgcacttatcaatgggtatgtgtccatccctaaattagcagtcgtgg
caggtttacctttaccaaacaactcaaagcacacgatacggtttatcctgaaaatggaaa
gtagctcagaatttgtgtttcctttggaatttacgttttttaataattccgaacaaatgg
ccgcgaatcggaaattaagagaggaaattgcaacattggagggggaaattgcaaacaaga
aacaaagttttcaatcgtctgaaaattctatgatgcttatccaggctaaaattgaaggac
tgagagagagggaacgacaagagaaagaaatcttaaagaatatttcttcacaagaatttg
ttgaaacattaaaaatgtcaaaagatgtaactgatcgggaagcatgtctaaagacaactg
agaaggaattggaaggcgagagaaatatgacgaaatctaacattcccccaggacctggtg
ccggtgaaccaaatgtttttggaccaattggtttgttagcggagataaagcgaggtggag
atatttccatagatttgaatcttcgacgcatcctctcttggcacttgcaaaataaattgt
ccgttatcgtaactgcgacctcaaagacaggtcgggatctcgaaaaactttttccaaagg
aacaattcatgttacttgacattatcaaggactatcccccaaacacagtcgccctctctg
ggcctggaaacccggtctatgcccgaactttgctcaacttcacgaagcctgaggccacag
cagcaacgagaaaagtgcttaacaaaattctaggcgatacaataatcatggacgatctgc
caacggctatagacttcatgaagaaatacaatcagggaagatataattgtccaactatcc
taaccatggatgggagacgtctcacgagcgacggaataatcggaggaagcgctacccacg
ttccaaaaagtgtacgattttcgttcggattggcatctggtgttgagctagcgcagattc
aggagcagttaaaaatcctccccaccttgaagaagatcatggaggaggctgaacaagtcg
aaagaacggatggcccaagattaaaatcgctaagggcttcatgtatcaagagtaaggaga
atattgggaagttggaggaacggcggatgaaggttgttgaaaggttagaaggttctatgc
cacggggaaaaaaccaacctcgccggacaagattgacgagaggggaggatcatgaaataa
cgaacaaaaaggctagaagaacttag
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