Francisella cf. novicida Fx1: FNFX1_1388 Help Entry FNFX1_1388        CDS       T01937                                  Name (GenBank) DNA ligase   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism fcf  Francisella cf. novicida Fx1 Pathway fcf03030   DNA replication fcf03410   Base excision repair fcf03420   Nucleotide excision repair fcf03430   Mismatch repair Brite KEGG Orthology (KO) [BR:fcf00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     FNFX1_1388    03410 Base excision repair     FNFX1_1388    03420 Nucleotide excision repair     FNFX1_1388    03430 Mismatch repair     FNFX1_1388  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:fcf03032]     FNFX1_1388    03400 DNA repair and recombination proteins [BR:fcf03400]     FNFX1_1388 Enzymes [BR:fcf01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      FNFX1_1388 DNA replication proteins [BR:fcf03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      FNFX1_1388 DNA repair and recombination proteins [BR:fcf03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      FNFX1_1388    NER (nucleotide excision repair)     GGR (global genome repair) factors      FNFX1_1388    MMR (mismatch excision repair)     DNA ligase      FNFX1_1388   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       FNFX1_1388 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 Nlig-Ia DNA_ligase_ZBD PTCB-BRCT RNA_ligase BRCT_2 HHH Motif Other DBs NCBI-ProteinID:  AEE87774 LinkDB All DBs Position complement(1427457..1429493) Genome browser AA seq 678 aa AA seqDB search MTPNEFFSIKYHILAKAELKAYIDKLADYLSQQSYLYHTLDKPIISDSDYDKLFRLLQDL VNDNPQFKPINSVLDRVGGEVLAGFETIKHKKKMTSLANVFSLEELRDFYGKIEYDIELE CEPKMDGLAISIFYKNGKFDYAVTRGDGIQGEKVSENVKTIRNVPLKLNTSNPPEELEVR GEIILDKQSFLSLNEYMQTHENKTFANPRNAAAGSIRMLDSKVVAKRPLKLYSYGIGYFS KDFVHPETQFELMNLLQSFGFTISDNMFLAKNFSEVEEYHHKMSHQRADLAYDIDGLVFK VNNIKLQDIIGYTARGPKWAVAYKFPAEEVESEVLNVEFQVGRTGAITPVARLKPVAVGG VIVSNATLHNINEIKRKDIRVSDRVIVRRAGDVIPEVVKSLPQYRKPDAQVVEMPTSCPV CDSAIENVNDQAIYRCTGGWHCQAQTTERLKHFVSRKAMDIDKLGAKLIEQLVAANLIKY PADIYKLNFDQLTGLERMGAKSSQNVLDSIKKSKTPSLARFIFAIGIKDIGEVSSDVLAN HFGSLESFRDAKFEELIEINDIGEIMANNIVSFWHDSLNIKIVEELLAIGIKIQNPVKVE HAYNESFTGKTVVITGSFENYGRTELTQLLKSIGAKVTSSVSKKTDMVICGENAGSKLTK AQDLGVEVIFEEDLQNLL NT seq 2037 nt NT seq  +upstreamnt  +downstreamnt atgactccaaacgaatttttttctataaaatatcatattttagctaaagcagaattaaaa gcttacatagataaattagctgattatcttagtcaacagagctatttgtatcatacctta gataagccaattatttctgactctgattatgataagctgtttagattacttcaagattta gttaatgacaatcctcaatttaagccgataaattcagtattagatcgtgttggaggtgag gttttagcagggtttgaaactatcaaacataaaaagaaaatgacatctttagcaaatgtt tttagtctagaggagctgcgtgatttttatggcaaaatagagtatgacattgagcttgag tgtgaacctaaaatggatggtctagcaatcagcattttttataaaaatggtaagtttgat tatgctgttacgcgtggcgatggtattcagggtgaaaaagtctcagaaaatgtcaaaact atccgtaatgtaccacttaagctaaatacttcaaaccctccagaagagctagaagttcgt ggtgagattatcttagataagcaaagttttctatctcttaatgagtatatgcaaactcat gagaataaaacttttgcaaatccgcgaaatgcagcagctggaagtattcgtatgcttgac tcaaaagttgtagcaaagcgaccacttaagctttatagctatggtattggctacttttct aaagactttgtacatcctgaaacccaatttgaacttatgaatctattacagagttttggc tttacaattagtgataatatgtttttggcaaaaaatttctcagaggttgaggagtatcac cataagatgagtcatcagcgtgctgatttagcttatgatattgatggcttagtttttaaa gttaataacattaaactacaagatattattggctacactgctagagggcctaagtgggct gtagcgtataagttcccagctgaagaggtggagtcagaagtgttaaatgtagaattccaa gttggtagaacaggagcaattacaccagttgcaagacttaagccagtagcagttggcggc gtaatagtttcaaatgcaaccttacataatatcaatgaaattaaacgcaaagatatccga gttagcgatagggtgatagtacgtagagcaggagatgtcatccctgaagttgttaaaagt ttgccacagtatcgtaagcctgatgcacaggttgttgagatgccaacaagttgtccagtt tgtgattcagcaattgagaatgttaacgatcaggctatatatcgttgtacaggaggatgg cattgtcaggcgcaaacgacagagcgtttgaaacattttgtttcacgtaaagcaatggat attgataagcttggagctaaactaattgaacaacttgttgctgcaaatttaatcaagtat ccagccgatatttacaagctcaattttgatcaattgacaggcttggaaagaatgggtgct aaatcatcacaaaatgttttagactctatcaaaaaaagtaaaactccaagcttagcaagg tttatttttgctattggaatcaaagatatcggtgaagtatcatcagatgttttagcgaat cattttggtagtctagagagtttccgtgatgctaagtttgaggagctaatagagattaat gatattggtgagattatggctaataatattgtttcattttggcatgattctctaaatatt aagattgtagaagagcttttagctattgggattaagatacaaaatccagtaaaagttgaa cacgcctataacgagagcttcacaggtaaaactgttgttattactgggtcttttgagaac tatggtcgtacagaacttacacagcttcttaagtcaattggggcaaaagttacctcaagt gtctctaaaaaaactgatatggttatttgtggtgagaatgctggaagtaagcttaccaaa gctcaagatttaggtgttgaggttatttttgaagaagatttgcaaaatttgttatga

DBGET integrated database retrieval system