Flavobacterium cupriresistens: LNP23_04225
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Entry
LNP23_04225 CDS
T10329
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
fcg Flavobacterium cupriresistens
Pathway
fcg01501
beta-Lactam resistance
fcg01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
fcg00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LNP23_04225
01503 Cationic antimicrobial peptide (CAMP) resistance
LNP23_04225
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fcg02000
]
LNP23_04225
01504 Antimicrobial resistance genes [BR:
fcg01504
]
LNP23_04225
Transporters [BR:
fcg02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LNP23_04225
Antimicrobial resistance genes [BR:
fcg01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LNP23_04225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
DUF5693
Motif
Other DBs
NCBI-ProteinID:
UFH43429
LinkDB
All DBs
Position
937178..940321
Genome browser
AA seq
1047 aa
AA seq
DB search
MDNFFVRRPIVAIVLSIFIVLIGGLSILSTPVAQYPEIAPPLVQVSTSYRGANALNVEQA
VATPIEQKVNGVENMLYMQSTNTGDGSMSLSITFDMGTDLDIATMLTQNRVAEATNKLPQ
DVKTTGVTTKKSLAMPLLILSLYSPNKTFDNNFLTNYANINIVDALARIKGVGEVTLYGG
SSYAMRIWVKPDIMSKYNLTVPDIVRSIQEQNAIAPGGKFGAPPAKDKNDFTYNVTLKDR
LVNPEDFENIILKSNLSNQQVRLKDVATVSLGTESYASIAKLNGSPAGTIGIKQMPGSNA
LEVAENVKKTIEGLSKRFPQDLKYKVSLDTTLAISEGIDEILHTLFEAIILVILVVFIFL
QNWRATLIPLLTVPVSLVGVFMLFPLLGFSVNVLSLLGLVLAIGIVVDDAIVVVEAVMHH
IEQGMSPRDATNQAMKEVSGPVIAIAIVLTAVFIPVALTPGITGRLYQQFAITIAISVIF
SALSALTLSPALCSLLLKPNQESKGWLGRFFKAFNQKFSAFTDKYTGFSGYLIKKMTRSF
IFIGILIVAIILLGGRIPGGFVPEEDQGYMFVNIELPGASSLERTNKVIDKVENILSKNE
GIDSYTSIAGFSLIKNSVATNNGFFFVSLKEWKEREQDVFQILKEVNGKVVFGIPEATVF
AFGPPPISGIGNAAGFTIMLQDKEGQTPQYLYQNAQRFMAEAKKRPEIGTIRTTFNPNVP
QISLDIDREKVSELNLSLSDVNLAIGASLGGQYINEFNKFGRQYIVLLQAAPNYTVNPED
INKIFVRSKDNKMIPISSIATIRKESGPEFTTRFNLYRAAEVGGTPAPGYTSAEAMDALQ
ETAEKVLPSGMGYQWSNMSFQEKQAEGKGNTVFLMALLFVFLILAAQYESWKLPFSVLLG
TPFAVFGAFLGLFLCRLISPDYVNNVFAQIGLVMLIGLAAKNAILIVEFAKEEYEKGMPV
KEAALYAAKLRFRPILMTAFAFILGVVPLLTASGAGAQARKVMGLTVFSGMLVATILGVC
LIPVLFVFIESFGKKPSEEIDETKKEE
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atggataatttttttgtacgaagaccgatagtcgccatagtattgtccatttttattgtt
ttaattggtggactctctatactctcgacccctgttgcgcaatatcccgaaattgcaccg
cctttggtacaggtatccaccagctatcgtggagccaatgccttaaatgtcgagcaagcc
gtagcgacacctattgagcaaaaagtaaatggtgttgaaaacatgctttacatgcaatcg
accaataccggagacggaagtatgtctctttcgatcacctttgatatgggaaccgatttg
gatatcgccacgatgttaacacaaaacagagttgccgaggcgaccaacaaactcccgcaa
gatgtaaaaaccaccggtgtgactaccaaaaagtctctcgccatgccgttgttgattttg
tccttgtattcgcccaacaaaaccttcgataataactttctaaccaattatgccaacatt
aatattgtggatgcattggcccgtattaaaggagttggagaagtaactctttatggaggt
agcagttacgccatgcgtatttgggtcaaacccgatatcatgtccaaatacaacctgaca
gttcccgacattgtccgatcaattcaggaacaaaatgcgattgcaccggggggaaaattt
ggcgcaccacccgcaaaagacaaaaacgattttacttataatgtaacccttaaagatcgt
ctggtaaatccggaagattttgagaatattattctaaaatcaaatctaagcaatcagcag
gttcgattaaaagatgtcgccaccgtttcgttgggaactgaaagttacgcttcaatagcc
aaattaaacggaagtcccgccggaaccattggtattaaacaaatgccgggttcaaatgct
ctcgaagttgctgaaaatgtcaaaaaaacaatcgaaggattaagcaaacgctttccacag
gatctaaaatacaaagtttctttagacacgacccttgccatttcggaaggaatagatgaa
atcctgcacactttgtttgaagccattattttagtgattctggttgtttttatctttttg
caaaactggcgtgcgactttgattccgcttttaactgtccctgtttcacttgttggtgtt
tttatgctctttccgctcttaggattttcggtcaatgtactttctcttttaggcttagta
ttggccatcgggattgtggtcgatgatgccatagtcgtcgtcgaggccgtcatgcaccac
attgagcagggtatgtcgcccagggatgccaccaaccaagccatgaaagaagtttcgggc
cctgtaattgccattgccattgtattaacggcagtatttattcccgtagctttaacaccc
ggaataacaggccgactctaccaacaatttgccattacaattgctatatcggtgattttc
tctgctttaagcgctttaactttaagtccggctttatgttctcttttgttaaaacccaat
caggaatcaaaaggatggttaggccgattctttaaagccttcaatcaaaagtttagtgcg
ttcaccgataaatacacaggtttctccggttatcttatcaagaaaatgacgagaagtttt
attttcatcggaatcttaattgttgccattattcttttaggtggaagaattccaggtgga
tttgttcccgaagaagatcagggctatatgtttgtgaatattgaacttcccggcgcttct
tccttagaaagaaccaataaagtcatcgacaaagtagaaaacatcctctccaaaaacgaa
gggatcgattcctatacttcgattgcaggatttagtttgatcaaaaactctgttgctact
aataatggtttcttttttgtttcgctaaaagaatggaaagaacgcgagcaagacgttttc
caaatcctcaaagaggtaaatggaaaagtggtttttggaattcccgaagctactgttttt
gcctttggacctccgccaatttccggaattggaaatgccgccggatttacaattatgctt
caggacaaagaaggacaaacgccacaatatctctatcaaaacgcgcaacgttttatggca
gaggctaaaaaacgtccggaaatcggaaccatccgaaccacttttaatcccaatgtacca
cagattagtctggatattgatcgggagaaagtcagcgaacttaatctttcgttgtctgat
gtcaatcttgctatcggagcaagtttaggaggacaatatatcaatgagttcaataaattc
ggccgacagtatattgtgctgttacaggctgcgccaaattataccgtaaatccggaagat
atcaataagatttttgttcgcagtaaagacaacaaaatgattccaatctcgagtattgct
acgatccgaaaagaaagtggtcctgaatttacaactcgttttaatttataccgggccgcc
gaagttggcggaactcccgcaccgggatacacctcagcggaagccatggatgccttgcag
gaaaccgccgagaaagtattgccttcgggaatgggatatcaatggtcgaatatgagtttt
caggaaaaacaagccgaaggaaaagggaatacagtattcctcatggcattgctttttgtg
ttcttaattttagctgcgcaatacgaaagctggaaattgccttttagcgtgcttttagga
actccttttgccgttttcggcgcttttctgggactgttcctctgccgattaatcagtccc
gactatgtcaataatgtttttgcccagattggtttagtcatgttaattggtttggctgcg
aaaaatgccattttgatcgtagaatttgccaaagaagagtatgaaaaaggaatgcctgta
aaagaagcggcgctatatgccgccaaactgcgtttccgccctattcttatgaccgctttt
gcttttatcttaggtgttgtgcctcttttaaccgctagtggtgccggagctcaagccaga
aaggtaatgggattaacggttttcagcggtatgctggttgccacaattttgggagtttgt
ttgattcctgtcttatttgtatttattgaaagttttggtaaaaaaccttcagaagaaatt
gatgaaactaaaaaggaagaatga
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