Falco cherrug (Saker falcon): 102047382
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Entry
102047382 CDS
T02911
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
fch
Falco cherrug (Saker falcon)
Pathway
fch03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fch00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102047382 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fch03041
]
102047382 (EFTUD2)
Spliceosome [BR:
fch03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
102047382 (EFTUD2)
Complex C
U5 SnRNP specific factors
102047382 (EFTUD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Septin
FANCL_d3
Motif
Other DBs
NCBI-GeneID:
102047382
NCBI-ProteinID:
XP_005447041
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDDDDDELGRESKDLDELEDDDDDDDMGDHDEDHPGMEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFSLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTIVLPDTKGKSFLFNIIDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLVL
SPLLGNVCFSSSQYSICFTLGSFAKIYADTYGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFILEPLYKILAQVVGDVDTTLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKVGAKTKIEHTYTGGVDSDLGEAMSECDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATVTEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKSLLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggacaccgacctgtacgacgagtttgggaactacatcgggccagagctggactcggac
gatgacgacgacgagctgggcagagagtccaaagacctggacgagcttgaggatgatgac
gatgatgatgatatgggggaccatgatgaggaccaccctgggatggaggtggtgctgcat
gaggataagaaatactatcccaccgctgaggaggtctatgggcctgaagtagagacaata
gtacaagaggaagacacgcagcctctcactgagcctattattaaacctgtgaaaacaaaa
aaattctctctgatggaacagacgttaccggtcactgtctacgagatggatttcctggca
gatctgatggacaactcagagctaattcgaaatgtgactctgtgtgggcaccttcaccac
ggcaagacttgttttgttgactgcctgatagaacagacacacccagaaatccggaagcgc
tacgaccaggacctttgctacactgatatattgttcacagagcaagagaggggagtaggg
atcaagagcacaccagtgacaattgttctgccggacaccaagggaaagtcttttctcttc
aacatcatcgacactccaggtcacgtcaatttttctgatgaggtgacagctggccttcgt
atttcggatggcgttgtgcttttcattgatgcggctgagggggtaatgctgaacacggag
aggctgatcaagcacgcggtgcaggaaaggctagcagtgaccgtgtgcatcaacaagata
gaccgactgatcctggagctgaaattgccccctacggatgcttactacaaactcagacat
atcgtagacgaagttaatggtctgatcagcatgtattctaccgatgagaacctcgttctg
tctccccttctggggaatgtgtgtttctccagttcacagtacagcatctgcttcacgctg
ggatcttttgcaaagatttatgcagatacatatggcgatatcaattatcaggagtttgca
aagcggctttggggtgacatctacttcaacccgaagacccgcaagttcactaaaaaggcc
ccaacgagcagttcccagcgcagttttgtggagttcattctggagcccctgtacaagatc
ttggctcaggtggtgggggacgtggacacaaccctacccaggactctggatgaacttggc
atccacctgaccaaagaggaattgaaattgaacatccgacccctcctgcggcttgtctgc
aagaagttctttggggaattcacaggctttgtggacatgtgtgtgcagcatatcccctcc
ccgaaggtgggagccaagacaaaaatcgagcatacctacactggtggtgtcgactctgat
ctaggggaggccatgagtgaatgcgaccctgatggtccactgatgtgtcacacaacaaaa
atgtacagcacagacgatggtgttcagttccatgcctttggcagagtgctcagtggtacc
atccatgctgggcagcctgtgaaggtccttggagaaaactataccttggaagatgaggag
gattcccagatctgcaccgtcggacgcctctggatctcggttgcaaggtatcacatagag
gtaaaccgggttcctgctggcaactgggtgctgattgagggagtggaccagcccatagtg
aagactgcaacggtcacggagcctcggggcaatgaagaggctcagatcttccgtcctctg
aagttcaacaccacatctgttatcaaaatagctgtagagccagtcaacccctcagagctc
cccaaaatgttggatggtctccgcaaagtcaacaagagttacccctcacttactactaag
gtggaagagtctggggagcatgtgatcctggggacgggggagctctacctggactgtgtg
atgcacgatctacggaagatgtattcagagattgatatcaaggtcgccgatccagttgtg
acattctgtgagacagtggtggagacatcctccctgaagtgctttgctgagacacccaac
aagaagaacaagatcacaatgattgctgagcctctggagaaggggctcgcagaggacatt
gaaaatgaagtagtccagataacgtggaacagaaagaagctgggtgaatttttccagacc
aaatacgactgggatttgctggctgcccgttccatctgggcctttgggccagacgccact
ggcccaaacatcctggtagatgatacgctgccctcagaggtggacaagtcgctgctgggc
tctgtgaaggacagcattgtgcagggatttcagtgggggacgagggaagggcctctctgt
gatgaattgatccgcaatgtgaagtttaagatcctggatgcagtgatcgctcaggagccc
ttgcatcggggtggaggacagatcatcccaacagcccggagagtggtgtattccgctttc
ctgatggccacccctcgcttgatggagccctactactttgtggaggtgcaggctcctgcc
gactgcgtgtctgcggtgtacacagtcctggccagacggagaggccatgtgacgcaagat
gctcccatcccgggctctcctctctacaccatcaaggcctttatcccagccattgattct
tttgggttcgagacagacttgaggacccacacgcagggacaagccttctcgctgtctgtc
ttccaccactggcagattgtgcctggtgaccccttggacaagagcattgtcatccgaccc
ctggagccccagccagccccacatctggctagagagttcatgatcaagaccaggcgtagg
aagggcttgagcgaggatgtgagcatcagcaagttcttcgatgaccctatgttgctggag
ctggccaagcaagatgtcgttctcaactaccccatgtga
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