Flavobacterium commune: BIW12_12470
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Entry
BIW12_12470 CDS
T05006
Name
(GenBank) efflux transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
fcm
Flavobacterium commune
Pathway
fcm01501
beta-Lactam resistance
fcm01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
fcm00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
BIW12_12470
01503 Cationic antimicrobial peptide (CAMP) resistance
BIW12_12470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fcm03036
]
BIW12_12470
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fcm02000
]
BIW12_12470
01504 Antimicrobial resistance genes [BR:
fcm01504
]
BIW12_12470
Chromosome and associated proteins [BR:
fcm03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
BIW12_12470
Transporters [BR:
fcm02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
BIW12_12470
Antimicrobial resistance genes [BR:
fcm01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
BIW12_12470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YknX_C
RND-MFP_C
BSH_CzcB
BSH_RND
CzcB_C
Beta-barrel_YknX
Peptidase_M23
BSH_YknX
Beta-barrel_RND_2
HH_EMRA
CSD2
Motif
Other DBs
NCBI-ProteinID:
APA01002
UniProt:
A0A1D9PEM3
LinkDB
All DBs
Position
complement(2990936..2991982)
Genome browser
AA seq
348 aa
AA seq
DB search
MKSTTIIISLLTFPLFFSCKDEKKENNPFESADIISVKTASVESLAFTNNISVSGLITTE
NQANYGFKIGGVVSRIYVEEGQFFKKGQLLATLDETEIGAGLNQTDLNVKKYERDYTRAL
NLYKDSVYTLEQLQNTKTGLDIAKKQKNAVAFNARYAKIFATADGFVARKIANVGEIVGA
GSPVLAINETTQNNNYLLKIGVTDQEWASVKTGQKAIVKLDGYPEKNFEATVFRKSQSAD
AALGSFQVELKLKMGNIKPAVGMFGKADIQTNKAQDLIVIPYNSLIEADGNKAFVFIVKN
NKVKRQSVTINKFENNKVFIKDGLQKTDQIVISNSAYLNEQSTIKIIK
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcaacaacaataataatctctctattgacttttccgctttttttctcatgtaaa
gacgaaaaaaaagaaaacaatccatttgaatcagctgatattatttcagtaaaaacggca
tcagttgaatcattagcatttaccaacaatataagtgtttcaggcttaataactacagaa
aaccaagctaattacggttttaaaattggtggcgtagtaagtcgcatttatgtagaggaa
ggtcagtttttcaaaaaagggcaactcttagcaactttagatgaaacagaaatcggtgca
ggattaaatcaaaccgatctaaatgtaaaaaaatacgagcgtgattatacacgagcctta
aatctgtataaagacagtgtttatactttagaacaattacaaaatacgaaaacaggtctt
gacattgctaaaaaacagaaaaatgctgtggctttcaatgctcgttacgcaaaaatattt
gcaactgctgatggttttgtagcaagaaaaatagccaatgtaggagaaattgttggtgct
ggttctcctgttctagcgataaatgaaacaacccaaaacaacaattatttactaaaaatc
ggagtaacagaccaagaatgggcatctgtaaaaacaggtcagaaagctatcgtaaaactt
gatggctatccagaaaagaattttgaagcaaccgtatttagaaaatctcaatctgctgat
gctgccttaggttcttttcaggtagagttaaaactcaaaatgggaaatataaaaccagct
gtaggtatgtttggaaaagctgatattcaaaccaataaagcacaagatcttatcgtaatt
ccatacaattcacttatagaagctgacggaaacaaagcctttgtatttatcgtaaagaat
aacaaggtgaaaagacagtcggttacaataaataagtttgaaaataataaagtattcata
aaagatggtcttcaaaaaacggatcaaatagttatttctaacagcgcttatttaaacgaa
caatctacaatcaaaataattaaataa
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integrated database retrieval system
