Flavobacterium commune: BIW12_15590
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Entry
BIW12_15590 CDS
T05006
Name
(GenBank) efflux transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
fcm
Flavobacterium commune
Pathway
fcm01501
beta-Lactam resistance
fcm01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
fcm00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
BIW12_15590
01503 Cationic antimicrobial peptide (CAMP) resistance
BIW12_15590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fcm03036
]
BIW12_15590
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fcm02000
]
BIW12_15590
01504 Antimicrobial resistance genes [BR:
fcm01504
]
BIW12_15590
Chromosome and associated proteins [BR:
fcm03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
BIW12_15590
Transporters [BR:
fcm02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
BIW12_15590
Antimicrobial resistance genes [BR:
fcm01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
BIW12_15590
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_RND
RND-MFP_C
BSH_RND
YknX_C
HH_MFP_RND
BSH_CusB
Biotin_lipoyl
Beta-barrel_RND_2
Mfa_like_1
BSH_YknX
HH_EMRA
PNGase_F-II_N
BSH_CzcB
BSH_LcnD
CzcB_C
Motif
Other DBs
NCBI-ProteinID:
APA00737
UniProt:
A0A1D9PDT2
LinkDB
All DBs
Position
3730034..3731239
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AA seq
401 aa
AA seq
DB search
MDSETFISKRSSKSNINLRKTITMKKITLISILALFVISCNDKNAAPPATTAPSLPVMNI
KSQEATTENEYPASLQGAVDVEIRPQVSGNLERIYVDEGAYVTKGQTLFKINERPFREQL
NNALANLHAAEAAYLNAQLEVDKLTPLVHNKVVSDYQLKTAKATQKIAAANIEQAKAMVG
SARINLGYTNVTAPVSGYIGRLPKKQGSLVAATDIEPLTNLSDVHEVYAYFSLGETDFIK
FKSAYSGNTLGDKIKKLPPVTLVLADNSAYPQSGKIDMVDGQFDKNTGAITVRATFPNKN
GTLRSGNTGKIRLGVQHDDAILIPQSATIEMQDKVFVFTVNKQNKVNKMPINISGKSGTN
YLIKDGIKSGDQIVLSGIDKLQEGQLIQPEKPKAQIAQIIN
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggattctgaaacgtttatttcaaaaagaagttctaaatcaaatattaatttaaggaaa
acaataactatgaaaaagattaccctaataagtatactagcattattcgttatcagttgc
aacgataaaaatgccgctccaccagcaactacagcccctagccttccagtaatgaacatt
aaatcacaggaagccactacagaaaatgaatacccggcttccctgcaaggtgctgtagat
gttgaaatacgcccacaggtaagcggaaatctggaaaggatttatgttgatgaaggtgct
tatgtaactaaaggtcaaacactttttaaaataaacgagcgtccttttcgtgagcaatta
aacaatgctctggctaatcttcacgcagcagaagcggcttatttaaacgctcagttagaa
gtcgataagctgacaccattggtacacaacaaagtagtttcagactatcagttgaaaacc
gctaaagcaacacaaaaaatcgctgctgccaatattgagcaggcaaaagcaatggtgggt
tcggccagaattaatttaggatatactaatgttacagcccctgtaagcggatacattggg
agattgcctaaaaaacaaggaagtttggttgctgcaactgatattgagcctttaaccaac
ttatccgatgtgcatgaagtatatgcttacttctcattaggcgaaaccgattttatcaaa
ttcaaatcagcgtacagcggaaatacccttggcgataaaatcaaaaaattacctcccgtt
actttagtccttgccgataattcagcttacccacaatcaggaaaaattgatatggttgat
ggtcagtttgataaaaacacaggagccattaccgttagagctactttcccaaacaaaaac
ggaacattacgttccggaaataccgggaaaatccgattaggagtgcaacatgacgatgcg
attttaattccacaatcggctacaattgaaatgcaggataaagtttttgttttcaccgta
aataaacagaacaaagtcaacaaaatgccgattaacatcagcggaaaaagcggtactaat
tacttaatcaaagacggaataaaatcaggtgaccaaattgtattaagcggtatcgacaaa
cttcaggaaggacaactgatccagcctgagaaaccaaaagcacaaattgctcaaattatt
aactaa
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