KEGG   Flavobacterium columnare: FCOL_00415
Entry
FCOL_00415        CDS       T01653                                 
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
fco  Flavobacterium columnare
Pathway
fco03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:fco00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    FCOL_00415
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fco03400]
    FCOL_00415
Enzymes [BR:fco01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     FCOL_00415
DNA repair and recombination proteins [BR:fco03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     FCOL_00415
 Prokaryotic type
     FCOL_00415
SSDB
Motif
Pfam: HhH-GPD HHH RecR_HhH
Other DBs
NCBI-ProteinID: AEW84938
UniProt: G8X7C4
LinkDB
Position
complement(96175..96834)
AA seq 219 aa
MNKAEKVNFVINTLKELYPTIPIPLDHKDPYTLLIAVLLSAQCTDVRVNQITPLLFAKAD
NPYDMIKLSVEEIQEIIRPCGLSPMKSKGIFGLSQILIEKHGGMVPASFDALEALPAVGH
KTASVVMSQAFGIPAFPVDTHIHRLMYRWNLSDGSSVQQTEKDAKRLFPKETWNDLHLQI
IWYGREYSPARGWRLENDIITKTIGRSSVIKEYHKKKGS
NT seq 660 nt   +upstreamnt  +downstreamnt
atgaacaaagcagaaaaagttaattttgtaattaacactcttaaagaactctaccctact
atacctattcctttagatcataaagatccttatactttattaatagctgtcttactttct
gctcaatgtactgatgttagagttaatcagattacacctcttctttttgcaaaagcggac
aatccatacgatatgattaaattaagtgttgaggaaattcaagaaatcataagaccttgt
ggactatctcctatgaaatcaaaagggatttttggattatctcaaattttaatcgaaaaa
cacggaggaatggtacctgcttcttttgatgcgctagaagctttaccagcagtgggacat
aaaacagccagtgttgttatgagtcaagcttttggtattcctgcttttccagttgatact
catattcatagattaatgtatcgttggaatctttcagatggttcttctgtacaacaaact
gaaaaagatgctaaacggctttttcctaaagaaacgtggaatgatcttcatttgcagatt
atatggtatggtcgagaatattctccagcaaggggttggagacttgaaaatgatattatt
actaaaacgattggaagaagtagtgttataaaagagtaccataaaaaaaagggatcctaa

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