Flavobacterium crocinum: HYN56_14680 Help Entry HYN56_14680       CDS       T06596                                  Name (GenBank) DNA ligase (NAD(+)) LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism fcr  Flavobacterium crocinum Pathway fcr03030   DNA replication fcr03410   Base excision repair fcr03420   Nucleotide excision repair fcr03430   Mismatch repair Brite KEGG Orthology (KO) [BR:fcr00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     HYN56_14680    03410 Base excision repair     HYN56_14680    03420 Nucleotide excision repair     HYN56_14680    03430 Mismatch repair     HYN56_14680  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:fcr03032]     HYN56_14680    03400 DNA repair and recombination proteins [BR:fcr03400]     HYN56_14680 Enzymes [BR:fcr01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      HYN56_14680 DNA replication proteins [BR:fcr03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      HYN56_14680 DNA repair and recombination proteins [BR:fcr03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      HYN56_14680    NER (nucleotide excision repair)     GGR (global genome repair) factors      HYN56_14680    MMR (mismatch excision repair)     DNA ligase      HYN56_14680   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       HYN56_14680 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 DNA_ligase_ZBD PTCB-BRCT BRCT_2 TF_Zn_Ribbon Motif Other DBs NCBI-ProteinID:  AWK05414 UniProt:  A0A2S1YMU7 LinkDB All DBs Position 3267909..3269915 Genome browser AA seq 668 aa AA seqDB search MSIQETIQTLRNELNQHNYNYYVLDNATISDYDFDIKLKELQDLENKHPEFFDENSPTQR VGGAVTKNFKTVAHQYRMYSLDNSYSKEDLLDWENRIQRVLGNVNLQYTCELKYDGASIS ITYENGKLVQALTRGDGFQGDEVTTNIKTIKSVPLHLKGNYPDKFDIRGEIILPFKGFEK MNQELIEIGETPYSNPRNTASGSLKLQDSAEVAKRPLECLLYFVTGNNLPFKSQFEGLES ARSWGFKVPNEAKLVNNMNEVFDFIDYWDVHRHNLPYETDGVVIKVNSIQHQEELGYTAK SPRWAIAYKFKSEQVSTKLKSISYQVGRTGAITPVANLEPVQLAGTIVKRASLHNADQIE KLDIRINDTVFVEKGGEIIPKIIAVDLEKRPENSEPTHYISYCPECHTELVRNVGEANHY CPNFYGCPPQIIGRIQHYISRKAMDIEGLGGETVALLFKNGLVHNYADLYELKVEDILHL ERMAQKSAENLVNGVQKSKEIPFGSVLFALGIRFVGETVAKKLAKHYKNIDALSQASLMD LILVDEIGERIAKSVIEFFENEENKIIIERLKSYGIQFQIVEKINPNATEKFIGKTFVVS GVFSQFSRDELKKAIEDNGGKVGSSISAKTDFVVAGDNMGPAKLEKATKLNIPILSEEDF INKLNESE NT seq 2007 nt NT seq  +upstreamnt  +downstreamnt atgagcattcaagagactattcaaacattacgaaatgaacttaaccaacacaattacaac tattatgtgttagacaatgccacaatttctgattatgattttgatataaaactgaaagaa cttcaggatttagaaaataaacatccggagttttttgatgaaaattcgccaacacaaaga gtaggcggagctgttacaaaaaattttaaaacagttgcgcatcaatacagaatgtattca ttagataattcttattctaaagaagatcttttggattgggaaaatcgtattcaaagagtt ttaggaaatgtgaatttgcaatatacatgtgaattaaaatatgacggagcctcaatcagt attacttacgaaaacggaaaattggttcaggccctaactcgtggtgacggttttcagggc gatgaggtaacaacaaatattaaaactataaagtcggttcctttacatttaaaaggtaat tatcctgataaatttgacattcgaggagaaattatcctgccttttaaaggttttgaaaaa atgaatcaggaattaatcgaaataggtgagacgccttattcaaatcctagaaacacggct tcaggaagtttaaaacttcaagatagtgctgaggttgcaaaacgtccattggaatgtttg ttgtattttgttacaggaaataatttaccgtttaaatctcagttcgaaggtttggaatca gcgagaagctggggatttaaagtaccaaatgaagccaaattagtcaataatatgaatgaa gtttttgactttatcgactattgggacgtacatcgtcataatcttccttatgaaacagat ggtgttgttataaaagtaaatagcattcagcatcaggaagagttaggttatactgcaaaa tcgccgcgttgggcaatagcctataaatttaagtcggagcaggtttccactaaattaaaa tcaatttcttatcaggtgggtagaactggagctattacgcctgttgccaatttagaacct gtacagctcgcgggaacgattgtaaaaagagcctctcttcacaatgcagatcagattgag aaactggatattagaataaatgatactgtttttgtagaaaaaggaggagaaattatccca aaaattattgcagtagatttagaaaaacgtcctgaaaattcagaaccaacacattatatt tcttattgtcctgaatgtcatacggaattggttagaaatgttggagaagcgaatcattat tgtccaaatttttatggatgtcctccgcagattatcggaagaattcagcattatatttcc agaaaagcgatggatatcgaaggtcttggcggagaaaccgttgccttgctattcaagaat ggtttagttcataattatgctgatttatacgaattgaaagtagaagacattctgcattta gaaagaatggctcagaaatcggctgaaaatctggtgaatggcgttcagaaatcaaaagaa attccttttggaagtgtattatttgcattaggaattcgatttgtcggagaaacagtagct aaaaaattagcgaaacattataaaaatatagacgctttaagccaagcttctttaatggat ttaattttagttgatgaaattggtgaaagaattgcaaaaagcgttatcgaattctttgaa aacgaagaaaataaaatcattatagaacgtctaaaaagttacggaatacaatttcaaatt gtagaaaaaatcaacccaaatgctaccgagaaatttattggtaaaacttttgtagtttca ggagttttcagccaattttcaagagatgaattaaagaaagcgatagaagataatgggggg aaagtaggaagttctatttctgcaaaaaccgactttgtcgttgcgggagataatatgggg ccggctaaattagaaaaagcaactaaattaaatatacctatattatcggaagaagatttt ataaacaaattaaatgaaagcgaataa

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