Flavobacterium crocinum: HYN56_16110
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Entry
HYN56_16110 CDS
T06596
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
fcr
Flavobacterium crocinum
Pathway
fcr01501
beta-Lactam resistance
fcr01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
fcr00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HYN56_16110
01503 Cationic antimicrobial peptide (CAMP) resistance
HYN56_16110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fcr03036
]
HYN56_16110
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fcr02000
]
HYN56_16110
01504 Antimicrobial resistance genes [BR:
fcr01504
]
HYN56_16110
Chromosome and associated proteins [BR:
fcr03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
HYN56_16110
Transporters [BR:
fcr02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
HYN56_16110
Antimicrobial resistance genes [BR:
fcr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HYN56_16110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
BSH_CusB
YknX_C
HH_MFP_RND
RND-MFP_C
Biotin_lipoyl
BSH_YknX
HH_CzcB
BSH_CzcB
CzcB_C
BSH_YhbJ
KIF9
DUF2118
HH_EMRA
Beta-barrel_RND_2
Motif
Other DBs
NCBI-ProteinID:
AWK07468
UniProt:
A0A2S1YUQ9
LinkDB
All DBs
Position
3596431..3597564
Genome browser
AA seq
377 aa
AA seq
DB search
MTKQFFQNNAAIGRIAVLLIIISFSSCGKSADAQMAPPKPEVDFLQTNSADGAVEKKYPG
TVEGTVNVDIKAQVSGYLEAIYVKEGEYVNKGQSLFKIKGDVYTEQVNNSRAAYKSALAN
LANAKLEVEKIKPLVDGKVFSDMQLKTAQANYEAATAQVAQAKAALGSSQLNADFSLIKA
PVSGYISRIPNRIGNLVTPNDAVPLTTLSEINNVFVYFSLTEADYLAFSKDSKANQTVSL
IMADDSEYDQKGKLEVASGNIDRSTGTIALKAIFPNPKKILRSGGSARIVLNKSLSSVMT
VPMASVKDIQDKFFVFVLKDGNKVAMVPIEIAGSAGADYFVKSGLKSGDKVALNSIDVLY
DSMEVVPKIAAKNLSSK
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaacagttttttcaaaataacgcagcaattggcaggattgcagttttattgatt
ataatttctttttcttcctgcgggaaaagtgccgatgcgcaaatggcgcctccaaaaccg
gaagttgactttctacaaaccaattcagctgacggagcagtagagaaaaaatatcccgga
acagtcgaaggtactgtaaacgttgatataaaagctcaggtatcaggatatcttgaagcc
atttatgttaaagaaggagaatatgtaaataaaggacaatctctttttaaaatcaaaggc
gatgtgtatacagaacaagtaaacaacagccgtgcagcttacaaaagtgctttggcaaac
ttagccaatgctaaactggaagtagaaaaaattaaaccgcttgtggatggaaaagttttt
tcggacatgcagttaaaaacagcgcaggccaattacgaagccgcaaccgcacaagtagca
caggctaaagccgctttaggatcatctcagttaaatgccgatttctctttgattaaagct
cctgtaagcggctatattagccgtattccgaatcgtatcggaaacttagttaccccaaac
gacgctgttcccttaactacgctttctgaaatcaacaacgtatttgtgtatttctcatta
acagaagctgattatttagctttttctaaagattcaaaagccaatcaaaccgtaagttta
attatggcagatgacagcgaatacgatcaaaaaggaaaactggaggtagcgagtggaaac
attgatcgttcgaccggaacaattgctttaaaagccatttttccaaatccgaaaaaaata
ttgcgttcaggcggttctgcccgaattgtattaaacaaaagtttatcttctgtaatgaca
gttccaatggctagcgtaaaagatattcaggataaattctttgtttttgttttgaaagac
ggcaataaagtcgctatggttccaattgaaattgcaggaagcgccggagcagattacttt
gtgaaatcaggcttgaaatcgggtgacaaagtggctttgaattctatcgatgtactttat
gatagtatggaagtcgttccaaaaatcgctgctaaaaacttaagcagcaaataa
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