Flavobacterium collinsii: TRV642_2633
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Entry
TRV642_2633 CDS
T08703
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
fcs
Flavobacterium collinsii
Pathway
fcs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fcs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TRV642_2633 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fcs03400
]
TRV642_2633 (nth)
Enzymes [BR:
fcs01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
TRV642_2633 (nth)
DNA repair and recombination proteins [BR:
fcs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TRV642_2633 (nth)
Prokaryotic type
TRV642_2633 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
CAI2767489
UniProt:
A0A9W4TIB5
LinkDB
All DBs
Position
TRV642:complement(3006003..3006659)
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AA seq
218 aa
AA seq
DB search
MNKEARVTFVINTLKELYPTIPVPLDHKDPYTLLIAVLLSAQCTDVRVNQITPLLFAKAD
NPYDMIKMSVEEIKEIIRPCGLSPMKSKGIHGLSHILIDKHNGEVPQSFEALEALPAVGH
KTASVVMSQAFGVPAFPVDTHIHRLMYRWNLSNGKNVVQTEKDAKRLFPRELWNDLHLQI
IWYGREYSPARGWDLEKDVITRTIGKKSLLEEAAKKKI
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagaagctcgcgtaacatttgttataaatacgttaaaagaactctaccccact
ataccagtaccattagaccataaagacccgtatactctattaattgcagttttactttca
gcacaatgtacagacgttcgcgtgaatcagattacgccattgctttttgcaaaagctgac
aatccgtatgatatgattaaaatgtcggttgaagaaattaaagaaattattcgcccttgt
ggcttatctccaatgaaatctaaagggattcacggattatcacatattttaattgacaag
cataacggtgaagtaccacagagttttgaagctttggaagccttaccggcagttggtcat
aaaactgcaagtgtagtgatgtcacaggcttttggcgttcctgcctttccggtcgacaca
cacattcacagactaatgtacagatggaatctctccaacggaaaaaatgtagtacaaaca
gaaaaagatgctaaaagattattccctagagaactatggaatgatttacatctacagatt
atttggtacggacgtgaatattctccggccagagggtgggatttagagaaagacgttatt
acccgaaccattggtaaaaaatctttattagaagaagccgccaaaaagaaaatttag
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