Flavobacterium collinsii: TRV642_4615
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Entry
TRV642_4615 CDS
T08703
Symbol
bepF
Name
(GenBank) Efflux pump periplasmic linker BepF
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
fcs
Flavobacterium collinsii
Pathway
fcs01501
beta-Lactam resistance
fcs01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
fcs00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
TRV642_4615 (bepF)
01503 Cationic antimicrobial peptide (CAMP) resistance
TRV642_4615 (bepF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fcs03036
]
TRV642_4615 (bepF)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fcs02000
]
TRV642_4615 (bepF)
01504 Antimicrobial resistance genes [BR:
fcs01504
]
TRV642_4615 (bepF)
Chromosome and associated proteins [BR:
fcs03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
TRV642_4615 (bepF)
Transporters [BR:
fcs02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
TRV642_4615 (bepF)
Antimicrobial resistance genes [BR:
fcs01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
TRV642_4615 (bepF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
RND-MFP_C
Beta-barrel_RND
Biotin_lipoyl
BSH_CusB
YknX_C
HH_MFP_RND
BSH_CzcB
HH_EMRA
BSH_YknX
Beta-barrel_RND_2
HH_CzcB
Fe_hyd_lg_C
BSH_LcnD
BSH_ALG44
Motif
Other DBs
NCBI-ProteinID:
CAI2769244
UniProt:
A0A9W4TNF8
LinkDB
All DBs
Position
TRV642:complement(5341336..5342418)
Genome browser
AA seq
360 aa
AA seq
DB search
MKRIILFTGLIALVCLTSCTAKKEEKEEVEKFTATNPVKIDTSFTKQYVSQIKSVRNIEI
RAQEKGFLQNIYVDEGQFVKKGQLLFKIMPNMYQAELLKAQAEQKSVEIELQNSKLLADK
NIVSKNELSVAQAKLQSAKAEVALAKLHLSFTEIRAPFDGTIDRIPLKLGSLIDEGELMT
SLSDNSQMFAYFNVSEPEYLQYETNVKDRADNKVSLVLANGETFKEKGNVEVIESEFNNE
TGNIAFRARFPNSGKLLRNGETGQVQMLVPLKNAIVIPQKATYEIQDKKYVFVIDKNNKV
TSREITITGEIPDLYVIKTGLTENDKILLEGVQKVKENDKIKYEFQSPKAVMNNLRLKAE
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaattatcttgttcactggcttaattgccttagtgtgccttactagttgtaca
gctaaaaaagaagaaaaagaagaagtagaaaaatttaccgctaccaatccggtaaaaata
gacacttcgtttacgaaacagtatgtttcacaaattaaatccgtacgaaatattgaaatt
cgtgctcaggaaaaaggttttttacaaaacatctatgtcgatgaaggacaatttgtaaaa
aaaggacaactgttgttcaaaattatgccaaacatgtatcaggcagaattattgaaagca
caagctgaacaaaaatcagtagaaatcgaactgcaaaattccaaattactggcagacaaa
aatatcgtttctaaaaacgaactaagtgtagcgcaggcaaaattgcaatctgcaaaagcc
gaagtagcactggcaaaacttcatttatcatttaccgaaatcagagctccgtttgacgga
actatcgatcgtattccgttaaaattaggaagtcttattgatgaaggcgaattgatgacg
agtctttcagacaacagtcagatgtttgcttacttcaatgtttcagaacctgaatacctg
caatatgaaaccaatgtaaaagaccgtgctgataataaagtaagtctggttttggctaat
ggcgaaacttttaaggaaaaaggaaatgtagaagttattgaaagtgaatttaacaatgaa
accggaaacatcgcattcagagcgcgttttcctaattcaggcaaattgcttagaaatggc
gaaaccggacaggttcaaatgcttgtaccgcttaaaaatgcaatcgtgattccacaaaaa
gcgacttatgaaatccaggataaaaaatacgtttttgtgatcgataaaaacaataaagta
acttcaagagaaatcactataactggcgaaatccctgatttgtacgtgatcaaaaccgga
cttaccgaaaatgacaaaattttacttgaaggagttcagaaagtaaaagagaatgacaaa
atcaaatatgaattccaatctcctaaagcggtaatgaacaatttacgcttaaaagcagaa
tag
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