Flavobacterium cerinum: NOX80_08885
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Entry
NOX80_08885 CDS
T09039
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
fcu
Flavobacterium cerinum
Pathway
fcu01501
beta-Lactam resistance
fcu01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
fcu00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NOX80_08885
01503 Cationic antimicrobial peptide (CAMP) resistance
NOX80_08885
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fcu02000
]
NOX80_08885
01504 Antimicrobial resistance genes [BR:
fcu01504
]
NOX80_08885
Transporters [BR:
fcu02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
NOX80_08885
Antimicrobial resistance genes [BR:
fcu01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NOX80_08885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Patched
Motif
Other DBs
NCBI-ProteinID:
UUC47300
UniProt:
A0ABY5IYC6
LinkDB
All DBs
Position
complement(1983438..1986578)
Genome browser
AA seq
1046 aa
AA seq
DB search
MLKNIIDRPVLATVISIVLVILGILGLTRLSVTRFPDISPPTVTVTGSYPGGNSETVIRS
VVTPLEEQINGVENMQYIKSTASNDGTFSINVIFKQGVDPDQAAVNVQNRVQQATPKLPQ
EVIRMGLTTSKQQNSMIVIFNLYTEDNEKYDELFLQNYANINLVPQIKRVPGVGQAQIFG
QKDYSMRVWLDPRKMANAGLVPSDVTNAIADQSLESAPGKLGEESQSALEYVIRYKGKKN
KPEQYADIVVKNTGGNLLRLKDIARIEFGSISYSGDNKSDGKNAVTIAILQTSGSNANDI
EIGVNREIERLSKSFPPGIKYVNVMSTKERLDEATGQVKSTLIEAFLLVFIVVFLFLQDW
RSTIIPAIAVPVAIVGTFFFLLILGFTINILTLFALVLAIGIVVDDAIVVVEAVHSKMEE
DAGLSPREATHNAMSEITGAVISITLVMSAVFIPIGFMTGSSGIFYKQFAYTLAIAIIIS
AVNALTLTPALCAILLKNNHDHHGKSGFKQRFFTGFNTSFNNLTGRYIRGIRFLIGRKWI
ATGFVTAIIALAVYSMMSTPKSFVPLEDDGFMIYSLTMPPGTALDRTTATVEKIQAQLDN
VEAIENNTSITGFNILSNSASPAYAMGFIKLKPKKERGTVKDIDEIMSIVSGKLAGIKEG
SVMVFRSPPVEGFGVTSGAEIVLQDRMAKDPAVLKAMADNVIGQIMQQPGVQYAYTTFRA
DYPQLELEVDEDKAKQMGVSVRELLNNIQTYFSGDQSSDFTRFGKFYRVNVKADGIFRTD
EEAFNEIFVRNADMQMVPVKSLVTLKKVYGPESVNRYNLYNSVSITAVGLPGFSNGDIMQ
NIESVMDKLPSDYSYEWTGLSLEEKAAGNQTIAIFRLCLLFVFFLLAAQYESYLLPLAVM
LSIPTGVLGAFLGIKAVGLDNNIYVQVGLIMLVGLLAKNAILIVEFAVQRRQSGLSIIES
AIEGARSRIRPIIMTSLAFIVGMIPLMFASGGTAVGNRSISVSASIGMLSGVVLGLFVIP
LLYILFQYLQEKIFGVNKKINSTIKK
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaaatataatcgacaggccggttttggccacagtcatctctattgtccttgtc
atactgggaatcctcggtctgacaagattatcggttacacgatttcccgatatttctcca
cccacggtaacggtaaccggttcctatccgggcggtaacagtgaaacggtaattcgttcg
gttgtaacgcctttagaagaacagatcaacggtgtggaaaacatgcagtatatcaaatca
accgccagtaatgacggtaccttttcgattaacgttatctttaaacagggagttgatccg
gatcaggctgcggtaaatgtacagaaccgagtgcaacaggcgacgcccaaactaccgcag
gaggttatccgaatgggattaaccacatcgaaacaacagaacagtatgatcgttatcttc
aacctttatacggaagacaacgaaaaatacgatgagctgtttttacagaactacgcgaat
attaaccttgttcctcaaattaaacgggttcccggtgtcggacaagcccagattttcgga
caaaaggattattcaatgcgtgtatggttggatccgagaaaaatggccaatgccggactg
gttccttccgatgtaaccaatgctatcgctgaccaaagtcttgagtcggctcccggaaaa
ttaggagaagaatcacaatcggctttggaatatgttatccgctataaagggaagaaaaac
aaacccgaacaatatgctgatatcgtcgttaaaaataccggtggtaatttattgcgtctt
aaagatattgcccgcattgagtttggctcaatttcttatagcggtgataataaatccgac
ggtaaaaatgccgttacaattgcgattctgcaaacttcaggttccaatgcgaatgacatc
gaaattggtgttaatcgtgaaattgaacgattgtcaaaatcattccctcccggtataaaa
tacgtaaacgtaatgagtacgaaagagcgtcttgatgaggctaccggacaggttaaatcg
acactgattgaagctttccttttggtatttattgtggtttttctatttcttcaggactgg
cgctcgactattattccggctatcgcggtacccgtagcgattgtaggtacgtttttcttc
ctgttgattctcggatttacgataaatatattgaccctttttgccttagtactggcaatt
ggtattgtggtcgatgatgctatcgtagtcgtcgaagcagttcacagtaaaatggaagaa
gatgccggtttgagtcccagagaagccactcacaatgcaatgtctgaaattacaggagcg
gttatttcaattaccttagttatgtcggctgtatttatccctatcggatttatgaccggt
tcatcgggtatattttataaacagtttgcttatacgcttgctatagctattattatttcg
gcggttaatgcactaacgctaactcctgccctatgtgccattttattaaagaataatcac
gatcaccacggtaaatccggttttaaacaacgcttttttaccggttttaatacttctttt
aacaacctgaccggaagatacatcagaggtatccgttttttaatcggtagaaaatggatt
gccaccggatttgtgacggctataatcgcattggcggtatacagtatgatgtcgactcca
aaaagttttgttcccctggaagatgacggttttatgatttacagtcttaccatgccaccc
ggaacggcattggacagaactacagccacagttgaaaaaatacaggcacaactggacaat
gtagaagctattgaaaacaacaccagtattaccggttttaatattttaagtaatagtgcc
agcccggcttatgcgatgggttttatcaaactcaagcctaaaaaagaacggggaacggtt
aaagacattgatgaaataatgagcatcgttagcggtaaactcgccggcataaaagaaggt
tcagtaatggttttcagaagtccgccggtagaaggtttcggtgttaccagcggtgcagaa
attgtattacaggacagaatggctaaagatcccgcagtactaaaagcgatggccgataac
gtaatcggacagatcatgcagcaaccgggtgtacaatatgcttataccactttcagagcc
gattatccgcaactggaactcgaagttgatgaagataaagcgaaacaaatgggcgtaagc
gtacgggaattactcaacaatattcagacgtatttttccggtgatcaatcatccgatttt
acccgtttcggtaagttttacagagttaatgtaaaggctgacggtattttcagaacagac
gaagaagcgtttaatgagatcttcgtacgaaatgccgatatgcaaatggttcctgtaaaa
tcattggttacgcttaaaaaagtatatggtcctgaatcggtaaaccgttataatttgtac
aattccgtaagtataacggctgtaggattaccgggttttagcaatggtgatatcatgcaa
aatattgaatcggtaatggataaactgccatcggattatagttatgaatggaccggttta
agccttgaggagaaagcggccggaaatcaaaccatcgccatttttcgactttgtcttttg
ttcgttttcttccttttagctgcgcaatatgaaagttatctgttaccgttagccgtcatg
ctttctattccgaccggagttttgggtgcctttttaggaattaaagctgtaggattggat
aacaatatttacgttcaggtgggacttatcatgcttgtcggtttactagccaaaaatgct
attctaattgtagaatttgccgttcagagaagacaatcaggactttccattatagagtcg
gctatagaaggtgcacgctcgagaatacgacctatcattatgacgtcactggcttttatt
gtaggtatgataccgcttatgttcgcttcaggcggaaccgctgtcggtaaccgatcgatc
agtgttagtgcctccatcggaatgcttagcggtgtagtattgggcttatttgtgattcct
ttactctacatactcttccaatacttacaggaaaaaattttcggagtgaataagaagatt
aattcaactatcaagaaataa
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